Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2945 |
Symbol | |
ID | 8448558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3225442 |
End bp | 3226143 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042030 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003202272 |
Protein GI | 258653116 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000364354 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000119928 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCGACC AGAGAACGAC GAGCCCGCGA CCGTCCGCGG CCGAACCCGG CCCGGCCCTG CGCACGGCGG TGGGCGAGGC GCTGCGCGGC CTGATCGTGC GCGGCGAGCT CCCGCCGGGG GCGCGCCTGG TCGAGCGGAC GCTGGCCGAC CGGCTCGGCG TGTCCCGGGT TCCGGTCCGG GAGGCGCTGC GCGACCTGGA GGCCCAGGGG TATGCGGTCA CCCGGCCCAC CCGCGGCATC CAGGTGCGCG AGTACTCGGC CGCCGAGGTG GACGAGCTGT TCGAGATCCG GGCCGCGCTG GAGACGATCC TGCTGCGCCG GGCGACCGGT GGGGTGTCGC CCGGCGCGGC CGAGCGGCTG CGGGCATGCC TGGCCGAGAC GGCGGCGGAC CTCGCGGCCG GTGACCGGGC CGCCGCCGTC GCCGGCAACG CGCGGTTCCA CGAGGTGCTC ACCGACGTGG CCGCCGGCCC GCAGCTGCGG AGTCTGCTGG ATGGGCTGGG GGAGCGGATG CAGTGGCTGT TGACCCAGCA CGGCGACCCC GCCGCGATCC ATCTCGAACA CGTCGCCCTG CTCGACGCGC TCCTGGCCGG TGACCTGCCG GCGGTGGAAC GACTTGGTGC TCAGCACTTG TCGACCAGCC GGGCCGAGCT GGAGCGGCGC CACGAGGTGC GCCGGACGAA CGATCCGGGG GTGCGGTCGT GA
|
Protein sequence | MTDQRTTSPR PSAAEPGPAL RTAVGEALRG LIVRGELPPG ARLVERTLAD RLGVSRVPVR EALRDLEAQG YAVTRPTRGI QVREYSAAEV DELFEIRAAL ETILLRRATG GVSPGAAERL RACLAETAAD LAAGDRAAAV AGNARFHEVL TDVAAGPQLR SLLDGLGERM QWLLTQHGDP AAIHLEHVAL LDALLAGDLP AVERLGAQHL STSRAELERR HEVRRTNDPG VRS
|
| |