| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2899 |
|---|
| Symbol | |
|---|
| ID | 8448512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3169834 |
|---|
| End bp | 3172224 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645041985 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003202227 |
|---|
| Protein GI | 258653071 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000977115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000331786 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CCACCACCAC AGGGACCTCG CCGGCCGATC CGCCCGCCGC GGACCGGCAC
GACATGATCC GTGTGCACGG TGCTCGGGTG AACAATCTCA AGGACATCAG CGTCGAGATC
CCCAAGCGCC GGCTGACCGT GTTCACCGGG GTCTCCGGGT CGGGCAAGAG CTCGCTGGTC
TTCGGCACCA TCGCGGCCGA GTCCCAGCGG CTGATCAACG AGACCTACAG CGCCTTCGTG
CAGGGCTTCA TGCCTACGCT GGCCCGGCCG GACGTCGATG TGCTCGACGG GCTGACCACC
GCGATCATCG TCGACCAGGA GCGGATGGGC GCCAACCCTC GTTCCACCGT GGGCACCGCG
ACCGACGCCA ACGCGATGCT GCGGATCCTG TTCAGCCGCC TGGGCCAGCC GCACATCGGC
TCACCGCAAG CCTTTTCGTT CAACGTGGCC TCGATCAGCG GCGCCGGCGC GGTGACCTTC
GAACGGGCCG GGCAGACGAC CAAGGAACGC CGCGAGTTCT CCATCACCGG CGGGATGTGC
CCGCGCTGCG AAGGCATTGG CCGGGTCAAC GATTTCGACC TGACCGCCCT GTACGACGAG
AACAAGTCGC TCAATGAGGG CGCCCTGATC ATCCCCGGCT ACAGCATGGA CGGCTGGTTC
GGCCGGATCT TCCGTGGCTG CGGCTACTTC GATCCGGACA AGCCGATTCG CCGCTTCACC
AAGAAGGAAA TGCACGACCT GCTCTACCGG GAGCCGACCA AGATCAAGGT CGAGGGCATC
AACCTGACCT ACGAGGGTTT GATCCCTAAG ATCCAGAAGT CCATGCTGTC CAAGGATGTC
GAGGCGATGC AGCCGCACAT CCGGGCGTTC GTGGAGCGGG TGGTGACCTT CACCGTGTGC
CCCGAGTGCC AGGGCACCCG GCTGAGCGAG GGGGCCCGCT CGTCGAAGAT CAACGGCAAG
AACATCGCGG ACCTGTGCGC CATGCAGATC AGCGACCTGG CCGACTGGGT CCGGGAACTC
GACGAACCGT CGATGGGGCC GCTGATCACC GCGTTGAGCC AGACGCTCGA CTCCTTCGTC
GAGATCGGCC TGGGGTACCT GTCCCTGGAA CGGTCCTCGG GCACGCTGTC CGGCGGCGAG
GCGCAGCGCA CCAAGATGAT CCGGCACCTG GGGTCGTCGC TGACCGACGT CACCTACGTC
TTCGACGAGC CCACCATCGG CCTGCACCCG CACGACATCG CCCGGATGAA CAGCCTGCTG
CTGCAGTTGC GGGACAAGGG CAACACGGTG CTGGTGGTCG AGCACAAGCC GGAGGCGATC
GCCATCGGCG ACCACGCGGT CGACCTCGGT CCCGGGGCCG GCGCCGGCGG GGGCGAGATC
GTCTACGAGG GCACCGTGGC CGGGCTGCGG ACCAGCGGCA CCCTGACCGG GCAGCACCTG
GACGACCGGG CCGCGCTCAA ACCCTCGGTG CGCACGTCGA CGGGCGCGCT GGAGGTGCGC
GGTGCGGACA CCAACAACCT GCGCCGGGTC GATGTCGACG TGCCGCTGGG TGTGCTCGTC
GTGGTGACCG GCGTCGCCGG GTCCGGCAAG AGCTCGCTCA TCCACGGGTC GCTGTCCCGA
GTCGACGGTG TCGTCACCGT CGACCAGGGC GCGATCAAGG GATCCCGGCG CAGCAACCCG
GCCACCTACA CCGGGCTGCT CGAACCGATC CGCAAGGCCT TCGCCAAGGC CAACGGAGTC
AAACCCGCCC TGTTCAGCGC GAACTCGGAG GGTGCCTGCC CGAACTGCAA GGGCGCCGGG
GTGATCTACA GCGACCTGGC CATCATGGCT GGGGTGGCCA CCCCGTGCGA GGTGTGCGAG
GGCAAGCGCT TTCAGGCCGA GGTGCTCGAG TACACCTTCG GCGGCCAGGA CATCAGTCAG
GTGCTGGCCA TGTCCGTCGC CCAGGCCGAG CAGTTCTTCA GCGTCGGCGA GGCGAAACTG
CCGGCGGCAC ACAAGATCCT GGCCGCCCTG GTCGACGTCG GGCTGGGCTA CCTGTCCCTC
GGGCAACCGC TGACCACCCT GTCCGGCGGG GAGCGGCAAC GGATCAAGCT GGCCACCCAC
ATGGGGGAGA AGGGCGGGGT CTACATCCTG GACGAGCCGA CGACCGGCCT GCACCTGGCC
GACGTGGAGA ACCTGCTCGG TCTGCTGGAC CGGCTCGTCG ACACCGGCAA GTCGGTCATC
GTCATCGAGC ACCATCAGGC CGTGATGGCG CACGCCGACT GGATCATCGA CCTGGGTCCG
GGGGCCGGAC ACGACGGCGG CCGGATCGTC TTCGAAGGCA CTCCCGCCGA CCTGGTCGCC
GACCGGTCGA CGCTCACCGG CCAACACCTG GCCGACTACG TGGGTCGCTG A
|
|---|
| Protein sequence | MSTATTTGTS PADPPAADRH DMIRVHGARV NNLKDISVEI PKRRLTVFTG VSGSGKSSLV
FGTIAAESQR LINETYSAFV QGFMPTLARP DVDVLDGLTT AIIVDQERMG ANPRSTVGTA
TDANAMLRIL FSRLGQPHIG SPQAFSFNVA SISGAGAVTF ERAGQTTKER REFSITGGMC
PRCEGIGRVN DFDLTALYDE NKSLNEGALI IPGYSMDGWF GRIFRGCGYF DPDKPIRRFT
KKEMHDLLYR EPTKIKVEGI NLTYEGLIPK IQKSMLSKDV EAMQPHIRAF VERVVTFTVC
PECQGTRLSE GARSSKINGK NIADLCAMQI SDLADWVREL DEPSMGPLIT ALSQTLDSFV
EIGLGYLSLE RSSGTLSGGE AQRTKMIRHL GSSLTDVTYV FDEPTIGLHP HDIARMNSLL
LQLRDKGNTV LVVEHKPEAI AIGDHAVDLG PGAGAGGGEI VYEGTVAGLR TSGTLTGQHL
DDRAALKPSV RTSTGALEVR GADTNNLRRV DVDVPLGVLV VVTGVAGSGK SSLIHGSLSR
VDGVVTVDQG AIKGSRRSNP ATYTGLLEPI RKAFAKANGV KPALFSANSE GACPNCKGAG
VIYSDLAIMA GVATPCEVCE GKRFQAEVLE YTFGGQDISQ VLAMSVAQAE QFFSVGEAKL
PAAHKILAAL VDVGLGYLSL GQPLTTLSGG ERQRIKLATH MGEKGGVYIL DEPTTGLHLA
DVENLLGLLD RLVDTGKSVI VIEHHQAVMA HADWIIDLGP GAGHDGGRIV FEGTPADLVA
DRSTLTGQHL ADYVGR
|
|---|
| |