| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2880 |
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| Symbol | |
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| ID | 8448493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3147908 |
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| End bp | 3150625 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645041968 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003202210 |
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| Protein GI | 258653054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0349194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00245203 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCCGA TGGTGGGCCG GGCGGCGGAA ATCGGACAGC TCCGGCGGCT CATTTCCCGC
GCCGGACGGG GCGCCGGCGG CGCCGTGCTA ATCACCGGTG AGCCCGGCAT CGGCAAAACC
CGCTTGATTC AGGCGGCATC CAGCATTGCA GTTGAGGCCG CGCTCGCCGT TCGATACGGC
TCATGCGACC AGCTTGAGGT CGAGCGGACC CTCGGCGCGC CGCTGCGGGC GTTCGGCGGC
GGGATTGAGT CCCTGATGGG ATTGTCCACA GTTCGGACCC TACTGGCGGC CGGTGCGGCC
GCGGCGGCCG GATCACTCCT GGTCGATCGC CTGCTCGAGG AACTCGAACT CGAATGTGCG
CGCTCGCCGC TAGTCCTCGC CATCGAGGAT CTGCACTGGT CCGACACAAC GACGCTGGTC
TGGTTGCGAT GCGTAATTCG GCGCGCCCGC GAACTGCCCT TACTGGTGGT GCTGACCACT
CGTCCACCGG TCCCCGGCAC AGACCTATAC CGGGCGCTCT CCGGCCTTCC GCTGGAGCGA
CTCGATCTGG GTCCGCTGCC GTCTGAGGAC TCCTCGGCGC TGACGGCCGC AGTCCTGGGC
CAGGAGCCAA CTGCGCTGGC CAGGGCGGCG GTCGACCAGG CCGGTGGAAA CCCGCTCCTG
TTGCTGGCGA TCCTCGACGC ACTGAGTATC GGTGCCGATA GCGCTGTCGA CGGAATATCA
GCTTTGGTCA GGGAGCTAGA TCGACAGGCG CTGCGGACGC TCCAGATCGC CGCGGTGGTT
GGCACCGAGA TCGACCCCGT GGCGGTCGCT GCGATAGCGG GCATACGCAC GACCAATCTC
CTCGTAGACT TGGAGGCTGC CGCCGCGGCC GGCGTGGTCG TACCCAGGGG TGCCGGCTTC
ACCTTTCGCC ACGAGTTGCT CCGCGAAGCC GTGTTGGCGG AGCTGTCGCC GCAGGCACGC
GCTGCACTGC ACCGTGATGC GGCGCAGGTA CTTGCGACGA GCGGCGCCGG CGTTCTTGCG
GTTGCCGAGC AGTATGCCCG AGGCGCTGGC CCGGGCGACT ATGAGGCCGC CACGTGGCTG
CGATACGCGG CGCAGGAGAT CGTCGGGACA GCACCCGCGG CAGCTCTGCG GTTGTGCGAC
ATCGCGATCG CCGCGTGCGA TCGTGGGCGG CCGCCGGCCG AGCTCGTGGT GGCGCGGGTT
CGGGCCTTGG CCGGCGCCGG CCGGGCGGCA GAGGCCGAGG CGCTCGGTCG CACTCTGCTG
CAGGTAGGGC TGGCTCCTGC CGTCGAGGCG CGCCTGCGCC GGGAGCTGGC GTTCGCAGCT
TTCATGCAGG GACGTGCCGA TGTGGCGGCG ATCGAGATGG AGCGTTGCGG GGTTCTGACC
GACGATCCGG CGCTGCGAGC CCGGGTGCAG GGCGAGATTG CCTTCGCTCG ATTTCTGCAG
ATCGATCACC CCGGCGCCCG CGAAGCCGGT GAGCGGGCCA TCGCCGACGG GCTTGACGCT
AATGACGGAG CAGCACAGGT CGCCGGCGGG GGCGTTCTGT GTTTCCTCGA TCTGTTCCAG
ATGCGGCTCG ACGAGGCCGG TGGCCGCGCC CGGGAGATCG TGCAGCTTGC GGACCGACCC
GAGACAGTGG ACGCTCACGT CTTCCAGCCC TGGTTCATCG CCTCGGTCGT CTGGCTGGAG
GCGGACCGGT TCGACCTACT GGCCGACTGC GCCCGGCGCG GTCGCGAGAA TGCTGTTCGA
TACGGCTCGG CGTGGGCCGT TCCGGCCTAC GACGCGATCA CCGCCTTCGG CTGGCTCCGG
GTCGGCGAAA TCGACGATGC GGCCGCCACG GCGGAGGCGG CACTCAGCTA TGCCGATGGA
GTCGATGGAT TCGGGGTCGC GGTTTGGTGC AACTCGTTCC TCGCTCAGAT TGCGCTGCAT
CGAGGCGCGG ACGACGTCGC TGCCGAGCGG ATTGCAGCTG CCGAGCAGTG GCTGGCACGT
GGGCGTGCCC AGTTGGGTTT CGAGCAACTG TGCCTGGCCG CCGCGGGCCT GTCCGAGCAT
CGCGGTGATC TCGATCTGGC CTATTCCGTG TTGTCGGAGG TTTGGGACCT CTTCGTCGGC
ACCGGCGTCC GTTCCGCGCT ACCGTCCTTC GCGGGGCAAC TGGCGCGGCT AGCCAGCCGG
ACCGGCCATG CCGACCGCGG TGTCGAGGTA GCCGCCGTCC TGACCGAACT CGCGCCCATA
GCGGACACGC CCAGGGTTCG GGTCGTTGCT GAGATCGCCG CCGCGTGGCG AGACGGTGAC
GCCGACCGAG CGCTCCGGGC TGCCAAACTA GCCGCCGGCA CCCCGTTAAA ACCACTGGCG
GCCGCGACGC ACACCGACGC GGCGGCCCTT CTGCGCCTGC GAGGCCGAGC AGCCGAGGCC
GACCTGGTTG CCGCCTCGGC AGCGAGCCGA TGGTCGGCGA TGGGCGCCGA CGCCGACGCC
GCCAACAGTG CTGCGATGAG CCGCACCGCC CGACCCCTGA CCCCCCGCGC GCATTTCGGC
ATCACCTCGC TCACCGGCAC CGAGCGACGC GTTGTCGGGC TGGTCGCCAG CGGCAAGGCG
AATTCCGACA TCGCCGCCCT GCTAGGGATT TCACGGCGAA CGGTGGAGTC ACACGTCTCC
GCTGCCTACC GCAAGCTCGG GGTCAACTCC CGAGTGGCGA TGGCGCGAAT CGCGCTGCGC
CATGGCATCG GGGCCTGA
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| Protein sequence | MAPMVGRAAE IGQLRRLISR AGRGAGGAVL ITGEPGIGKT RLIQAASSIA VEAALAVRYG
SCDQLEVERT LGAPLRAFGG GIESLMGLST VRTLLAAGAA AAAGSLLVDR LLEELELECA
RSPLVLAIED LHWSDTTTLV WLRCVIRRAR ELPLLVVLTT RPPVPGTDLY RALSGLPLER
LDLGPLPSED SSALTAAVLG QEPTALARAA VDQAGGNPLL LLAILDALSI GADSAVDGIS
ALVRELDRQA LRTLQIAAVV GTEIDPVAVA AIAGIRTTNL LVDLEAAAAA GVVVPRGAGF
TFRHELLREA VLAELSPQAR AALHRDAAQV LATSGAGVLA VAEQYARGAG PGDYEAATWL
RYAAQEIVGT APAAALRLCD IAIAACDRGR PPAELVVARV RALAGAGRAA EAEALGRTLL
QVGLAPAVEA RLRRELAFAA FMQGRADVAA IEMERCGVLT DDPALRARVQ GEIAFARFLQ
IDHPGAREAG ERAIADGLDA NDGAAQVAGG GVLCFLDLFQ MRLDEAGGRA REIVQLADRP
ETVDAHVFQP WFIASVVWLE ADRFDLLADC ARRGRENAVR YGSAWAVPAY DAITAFGWLR
VGEIDDAAAT AEAALSYADG VDGFGVAVWC NSFLAQIALH RGADDVAAER IAAAEQWLAR
GRAQLGFEQL CLAAAGLSEH RGDLDLAYSV LSEVWDLFVG TGVRSALPSF AGQLARLASR
TGHADRGVEV AAVLTELAPI ADTPRVRVVA EIAAAWRDGD ADRALRAAKL AAGTPLKPLA
AATHTDAAAL LRLRGRAAEA DLVAASAASR WSAMGADADA ANSAAMSRTA RPLTPRAHFG
ITSLTGTERR VVGLVASGKA NSDIAALLGI SRRTVESHVS AAYRKLGVNS RVAMARIALR
HGIGA
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