| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2843 |
|---|
| Symbol | |
|---|
| ID | 8448456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3110035 |
|---|
| End bp | 3111684 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645041935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202177 |
|---|
| Protein GI | 258653021 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00015741 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0095029 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGA CCATGACGAC ACCAACCCCG GCCGCGGCCC CGGCCGGCAA GTCGATCGCC
TCGCTGCTGG GGGGCGGTTC GCCCGGCTCG GCCCGCCGGC TGGCCGACTC GGGTCTGTGG
GATCGTCAGC GGCAGTTCTA CCAGCAGCAG GCCCAAACCC TGTGGGGCAC CGCGATGGTG
CCGCACGGCA TCACCGGCAA TCCCCGTATC GCCGCCACCT ACGCCCGGCT CGTCGTCGAG
TTCCTGCGCA GCGTGCCGGC CGGCTCGGGC CGGCCCCACC TGGTCGAATT CGGTGCCGGC
TCGGGGCGTT TCGCCTTCCT ACTGGTGCGG GCGCTGCGCG CGCTCGCCCC TGGGCTGGAT
TTCACCTATG TGGCCACCGA TTTCTGCGCC GACCGGGTCG CCGGGTGGGC CGCGCACCCC
TCGTTCCATC CGTTGGTGGA CCAGGGCCTG ATCGACTTCG CCGTCCTGGA CGCGGACCGG
CCGGGCCCGT TGGAGCTGCT GGCCTCCGGG CGCACCCTGG ACGCCGGGTC GCTGGACGGG
CCGGTCGTCG GTATCGCCAA CTACGTCTTC GACACGCTGC GCCACGACAG CTACGCGGTC
TGCGGTGGCG AGCTGCACGA ATGCCGGGTC ACCCTTCCCG ACCTGCCCCC AGGCGCCCCG
GCGTCCGCCC TGGGCGAGTT GACCTGGGAC CTCGCGGACG GCCCGGTGGT TCCCCCGGAG
CTGTCCGGCG TCCTGCAGTT CTACGCCGAC ACCCTGGATG ACACCGCCGT TCTCGTGCCG
ACCGGCGGGT TGCGTTGCCT GGACTTCGTG TCCGAGCTGA CGACGGGGGC GACCTGCATG
CTGGTCGCCG ACAAGGGCCA TTGCCGCCCG GTGGAGCTGT GTTCGCAGCC GGCCCCCTCC
GTGGTACCGC ACGGGAACGG GTTTTCGCTG ATGGTCAACT TCGACCTGCT GGCCCGCGTG
GTCCGCGAGA GGGGCGGGGT GGCGGTGCTG CCCCGGGAGC CGGCCCGCAG CCTGGTGGTG
GCGGCCTTCG TCCGCGCCGG TCGCGACGGC GGACTGGACG ATCCGGAACG GTTCACCGCC
TGGGTGCAGG ACCAGCTGGT GGACACCGGC CCGGACAACT ACTTCACCGT CCGGTCGCTG
CTCGGCGGCG GCGCGGCCGC CGATCTGGAC ACGATGCTGG CCGGCCTGCG ACTGTCCCGG
TTCGAGCCGG GCCTGCTGAT CGAGCTGCTG CCGCGCCTGC TGGATGTGCT GCCGACCACG
CCCGACGCGA CCCGCGGCGA GGTCGAACGA TCCCTGCTGC AGCTGTGGGA CAACTGGTTC
CCGATCGGCG AACCCATCGA CATGGCGCTG TGTTTGGGCC TGGCGTTCTC GGCGATGGAC
CGGTTCGCCC GCGCGGTGGA TTTCCTGGAG CTCTCGGTCA AGGAGCATCC GGACAGCGCC
CCGGCGGCGT TCGCCATGGG CGTGGCCCGG CGCGGGTTGC GGGACCTGCG GGCGGCCCGG
GAGTGGGCCC AGCGGGCGGT GACCCTGGAA CCGGGATTCG GGCAGGCCAG GGTCTTGCGA
GCGGTCCTGG ACGAGGAGCT CGACACCCCA CTCGACTCCT CACTCGTCAC CCCACTTGAC
ACCCCACTGG TCACTGGACG GGGACGCTGA
|
|---|
| Protein sequence | MTVTMTTPTP AAAPAGKSIA SLLGGGSPGS ARRLADSGLW DRQRQFYQQQ AQTLWGTAMV
PHGITGNPRI AATYARLVVE FLRSVPAGSG RPHLVEFGAG SGRFAFLLVR ALRALAPGLD
FTYVATDFCA DRVAGWAAHP SFHPLVDQGL IDFAVLDADR PGPLELLASG RTLDAGSLDG
PVVGIANYVF DTLRHDSYAV CGGELHECRV TLPDLPPGAP ASALGELTWD LADGPVVPPE
LSGVLQFYAD TLDDTAVLVP TGGLRCLDFV SELTTGATCM LVADKGHCRP VELCSQPAPS
VVPHGNGFSL MVNFDLLARV VRERGGVAVL PREPARSLVV AAFVRAGRDG GLDDPERFTA
WVQDQLVDTG PDNYFTVRSL LGGGAAADLD TMLAGLRLSR FEPGLLIELL PRLLDVLPTT
PDATRGEVER SLLQLWDNWF PIGEPIDMAL CLGLAFSAMD RFARAVDFLE LSVKEHPDSA
PAAFAMGVAR RGLRDLRAAR EWAQRAVTLE PGFGQARVLR AVLDEELDTP LDSSLVTPLD
TPLVTGRGR
|
|---|
| |