| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2838 |
|---|
| Symbol | |
|---|
| ID | 8448451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3104850 |
|---|
| End bp | 3105644 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645041930 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003202172 |
|---|
| Protein GI | 258653016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000986934 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0303756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATT GGGACGGGGC CGGCTACGAG CGGATCAGCG GCCTGCAGCG CCGGCTGGCC
CGGGCCACGC TCGGGCAGCT GTCGTTGGCC GGCGACGAGC GGGTGCTCGA CGTGGGCTGC
GGAGACGGGT ACATCACCCG GGCGATCGCG GCCCGGCTCC CCGGCGGCTC GGTGCTCGGG
CTGGATGCCT CGCCGCGGAT GATCGCGGCC GCCCGCTCGC ACGCCGACCC GCCCGGCGCC
CGGGTCGCGT TCGAGGTCGG CGACGTGCTC GGATTGACCG CCGTCGACGA GTTCGACGTG
GTGGTCTCGT TCAACGCCCT GCACTGGGTG GCCGACCAGG TCGCGGCCCT CACCGCGATC
GGCCGGGCCA CCCGGCCGGC CGGGCGGGTG GTCGTCCAGC AGGTCTGCGC CGGCCCGCGC
CGCAGCCTGG AGGCGACCGC GATGGCGGTG TGCCACACCC AGGCGTGGTC GGCCTTCTTC
TCCGGCTTCG GGGCGCCGTT CGTGCATGTC GACCCGCGGC GGTACGCCGA TCTCGCGGCA
GCCGCCGGAC TGCGGGTGAC CGATCAACAG GTGGAGGACA TCCGGTGGGA TTTCGGCTCG
CGGGCGGCGT TTACCGACTG GTGCACCGTC GGTTTCGCCG ACTGGACCGG GCGGTTGCCG
CCGGATCGGG TGGCCGACTG GGTGCAGGCG GTGGTCGAGG CGTACCAGCA GCAGGTCGGC
GAGCCCGGCG TCTTCCGGTT CCTGCAGCTG CGGGCGGAAC TCGTGCCGTC GACGATCAGG
GGCTCGGGAA CGTGA
|
|---|
| Protein sequence | MTDWDGAGYE RISGLQRRLA RATLGQLSLA GDERVLDVGC GDGYITRAIA ARLPGGSVLG
LDASPRMIAA ARSHADPPGA RVAFEVGDVL GLTAVDEFDV VVSFNALHWV ADQVAALTAI
GRATRPAGRV VVQQVCAGPR RSLEATAMAV CHTQAWSAFF SGFGAPFVHV DPRRYADLAA
AAGLRVTDQQ VEDIRWDFGS RAAFTDWCTV GFADWTGRLP PDRVADWVQA VVEAYQQQVG
EPGVFRFLQL RAELVPSTIR GSGT
|
|---|
| |