Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2767 |
Symbol | |
ID | 8448379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3031984 |
End bp | 3033345 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645041859 |
Product | integrase family protein |
Protein accession | YP_003202102 |
Protein GI | 258652946 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000543052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000268456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGGCA TCGACGAGTA CCGCACCCCA GTGGGCGAGG TGCGGTGGCG TGTGCGCTGG CGGCAGCGAC AGGACGGCCG CGTCCTACGG CAATCAATCA CGTTTGAGAA GCGCCGCGAT GCCGACCATT TCGTTCGCAT GCTGGACGTT TTCGGCGGCG ACGGAAGCAA GGCCTCCGCT GCCGTCGCCG GCGCCAACCT GGCCATCAAG ACGGTGCGGG AGGTCATGCT CGCCTACATC GAGGCCAATC ACCGCGCGGC CGAGAGCCAG CTGCGCAAGT ACCGCAACCA GGTCCGCGAC CACTTCGACG ACACGTTAGG CCACACGCCG ATCGACCGAG TCGACGCAGA TGCGGTCCAG GCCTGGGTCG CTCGGATGCG CACCAAGCAA GTCGGCAAGT CCAACTCGCG AGCCCGAGGC ACCCCGGTCC ATCCGGTCCG CGCCGCCCGC CCCCCCGTCG TCGATCAGGC TCGTCTGCTG TCGCCCAAGA CCATCCGGAA TCTACACGGC CTACTTTCCG CGTCGATGGA ATGGGCGGTG CAGCGGGGCC TGCGAGCGGA CAATCCCTGC AGGGGGGTGT CGTTGCCGCG CGTGGAGGAA GTCGGGGACG AAATGTGCCT ACTCACCCAC GAAGAGTTCG ACCTGCTGCA CGACGCGATG ACGCCGCGGT ACCAGTTGCT GCTGCGCACC ATGGTCGGGA CCGGACTTCG TTGGGGAGAG ATCACGGCGC TGCAGGTGAT GGACGTGCAG CAGTCGTCGG AGATGGTCGC GCTTCGCGTC AATAAGGCAT GGAAGCGAGA CGGCGAGCAC CAGCACTACG TCGGCTCGAC GAAGACCAGC CGCAGCCGCC GGACGGTGTC GGTTGGCGAG ACGCTTGGCC GCGACCTGCT CACCCTCGCC GAAGGGAGGG CGCCCGACGA GCTGTTGTTC GTCAACGCCC GCGGGAGCCA GATCCGGCAC AACACATTCT GGGAGACGAA CTGGATCGCT GCGGTTCAGG CCGCGCAGAA TCCGCTTGAA CCGAAGGCCA ATGCGGCCAG AACCGGCCGC GCGAATGCCA CAGGGAGGCG AGTAGCTGGT AATAAGGGTG GGCGCGGGAA CGTCAAGAAG TTGACAAAGA CGCCGCGCAT CCACGATCTG CGCCACACCC ACGCTTCATG GATGATCGCC GCCGGCATCG ACCTGATGGT GCTGCAGCGC AGGCTCGGTC ACGAGTCCGT CACGACGACG ATCGACAGAT ACAGCCATCT GATGCCCAGC CAGCACATCG AAGCAGCGCG GGTGGCCGAA TTGGCAGCGC GACCCGCGGG TAGCGGTCGA CCGGCGTCAG ACAGCCGTTC GTTCGGGCAT GAAGCCGGGT AG
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Protein sequence | MAGIDEYRTP VGEVRWRVRW RQRQDGRVLR QSITFEKRRD ADHFVRMLDV FGGDGSKASA AVAGANLAIK TVREVMLAYI EANHRAAESQ LRKYRNQVRD HFDDTLGHTP IDRVDADAVQ AWVARMRTKQ VGKSNSRARG TPVHPVRAAR PPVVDQARLL SPKTIRNLHG LLSASMEWAV QRGLRADNPC RGVSLPRVEE VGDEMCLLTH EEFDLLHDAM TPRYQLLLRT MVGTGLRWGE ITALQVMDVQ QSSEMVALRV NKAWKRDGEH QHYVGSTKTS RSRRTVSVGE TLGRDLLTLA EGRAPDELLF VNARGSQIRH NTFWETNWIA AVQAAQNPLE PKANAARTGR ANATGRRVAG NKGGRGNVKK LTKTPRIHDL RHTHASWMIA AGIDLMVLQR RLGHESVTTT IDRYSHLMPS QHIEAARVAE LAARPAGSGR PASDSRSFGH EAG
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