| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2762 |
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| Symbol | |
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| ID | 8448374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3026420 |
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| End bp | 3027778 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645041854 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003202097 |
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| Protein GI | 258652941 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0831421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00208523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCGA CATCGGTGTT CGACTATGAC GTGGTGCGCC TGCTGCGGGA GCGGGTCGCG
GACCGGATGA CCCGGACCAA GCAGGAACGG GAGCGGCACG GTAGCCCGGA ACTGCGGGGC
GCCGACGAGC AACAGTTGGC GCACAGCCTG ATCACCAGCG AGGTGCAGCG GTACCTGGCC
GATCTGCTCT CCGCCGGCCA CGAGCTCCCG ACCGACGAGG GATTCGATCT TCGGCTGATC
GCGGCGGTCG ACGCGGCGAT GTACCGGGCG GGCGAACTCC AGGAGCTGTT GGACGACTCG
GACATCGAGA ACATCGACAT CAACGGATCG GACGAGGTTT TCATCACCTT CGGCGACGCC
CGGGGCAAGG TCCGCGGCGC GCCCATCGCC GGGTCGGACG ACGAACTGAT CGGGATCATC
CAGAACCTGG CCAGCTACGC CGGGATCAAC GCGCGCCCGT TCACCCGCGC CAGCCCGGAA
CTGGACCTGC GGCTGCCCGA CGGGTCGCGC CTGTCGGCGG TCATGGCCGC CTCCGAACGG
CCGATCGTCA GTATCCGCCG CAACCGGTTC CCGCAGATGT TCCTGTCAGA CCTGGTGGAC
CTGGGCACGA TCGACGAGCG GTTGGCGTGC TTCCTGGAAG CCTGCGTGCG GGCCCGGATG
AACATCGTGA TCGGCGGGGC GACGGACGCC GGCAAGACCA CCCTGCTGCG CGCGCTGATC
AATTGCATCG AGCCGGACGA GCGGCTCATC ACCGTCGAGC GGGCGCTGGA ACTTGGGTTG
CGGCGCCATC CCGACCTGCA CGCCGACGTC GTCGAACTCG AGGAGGTTCT GCCCGACCCG
GACGGCTCCG GTGGACTGAC CATCCGGGAA CTGGTGCGGC GTACCAGGCG ACACAATCCC
AGCCGCGTCA TCGTCGGCGA GGTCCTGGGG CCTGAGGTCG TTGAGATGCT TTCGGCCATG
AGCCAGGGCA ACAACGGCAG CCTGTCGACC CTGCACGCCC GCAGCGCCGC AGACGTTTTC
AACAAGCTCG CCCAGTATGC CGGGCAGTAC GAGCGAGTGG ACTTCCCGGT CGCGCAGAGC
CTGATCGCCG GCGCCGTCGA CTTCGTCGTG TTCATCGGCA AGAACCGTCT GCTGGGCGGG
CGACGGTGCG TCACCCAGGT GCTGGAAGTG GCGGGAGCAC CGGACGGCCA GGTCGCGTCG
TCGACGATCT TCGCGGCCTC ACCATTCGAC GGTCGAGCGA TCCGCGTCGA TGACGTCGCG
CTCGGTTTGG ACCGCGGCGT CGAACTCGCC GACGCCGGCT ACGACGACAC CGCCGGACAC
CACTCGTATC CGCCGGTGAT CCGCGCGAGG TCCGCATGA
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| Protein sequence | MTATSVFDYD VVRLLRERVA DRMTRTKQER ERHGSPELRG ADEQQLAHSL ITSEVQRYLA
DLLSAGHELP TDEGFDLRLI AAVDAAMYRA GELQELLDDS DIENIDINGS DEVFITFGDA
RGKVRGAPIA GSDDELIGII QNLASYAGIN ARPFTRASPE LDLRLPDGSR LSAVMAASER
PIVSIRRNRF PQMFLSDLVD LGTIDERLAC FLEACVRARM NIVIGGATDA GKTTLLRALI
NCIEPDERLI TVERALELGL RRHPDLHADV VELEEVLPDP DGSGGLTIRE LVRRTRRHNP
SRVIVGEVLG PEVVEMLSAM SQGNNGSLST LHARSAADVF NKLAQYAGQY ERVDFPVAQS
LIAGAVDFVV FIGKNRLLGG RRCVTQVLEV AGAPDGQVAS STIFAASPFD GRAIRVDDVA
LGLDRGVELA DAGYDDTAGH HSYPPVIRAR SA
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