Gene Namu_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2613 
Symbol 
ID8448225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2865724 
End bp2866926 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content70% 
IMG OID645041711 
Productsodium/hydrogen exchanger 
Protein accessionYP_003201954 
Protein GI258652798 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000102886 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0926259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA TGGACGCTCT GTTGCTGGTC TTCGCGGTGA CCCTGCTCGT CGCCGTGCTG 
GTGTCCGACC TCGCGCAACG GACCATCCTG TCCACCGCGG TCCTGTTCCT GCTGGTCGGC
ATCGTGTGCG GGGACGGCGT GCTCGGGCTG GTACCGCTGA CCCCGGACAG TCCGATCGTG
GCGACACTGG CCCAGCAGGC CCTGTTCTGG GTGCTGTTCA CCGATGGGAT GCGGGTCGGC
TGGTCCGACC TGCGCGCCGC CTGGCGGCTC CCGGGACGGG CCCTGCTGCT CGGCCTGCCG
CTCACGGTGG CCCTGACCGC GGCGCTGGCC GCCTGGCTGG TCGGCCTGTC CTGGCCCGAG
GCACTGCTGA TCGGCGCGGT GCTGGCCCCC ACGGACCCGG TGTTCGCCGC GGCCCTGGTC
GGCAACGAGC GGGTGCCAGG ACGGCTGCGC CAGCTGCTGA ACGTCGAGTC CGGCATCAAC
GACGGCCTGG CCCTGCCGCT CGTGCTGATC TTCCTGGCGA TGTCCGGCGA CGCGGATGCC
CAGCCGGCGA GCGGGACCCT GCTGGCCGAG TTGGTCGGCG GGGTGGCGAT CGGCGTCTTC
GTGCCCTACC TGGCCGTGCG CCTGGAGGGC AGCCGGCTGT TCTCGGCATC GGCGCGGTAC
CAGCCGCTCA CCGCGATCGC CATCGGTCTG TTGATCCTGG GGATCTGCCT GGCGACCGAG
GCCAATCTGT ACCTGGCCGC GTTCAGCGCC GGCATCACCA TCGCCAGCTG CGGCCCCCAT
CAACGGGAAT CGTTCGAGCC GATCGGCGAG CTGATCGCCG AACTGCTCAA GCTGGCCGCC
TTGCTGGTCT TCGGCGCCCT CATCTCGCCC GCCTTCCTGG CGGAGATCCC CTTCGGCGGG
TGGATCTTCG CGGCGCTGGC GATCATCCTC GCGCGACCGG CGGCGCTGGC GGTCTCCTTT
CTCGGTTCGT CCCTGACCAG GAGGGAACGG TGGACCGCGT TCTGGTTCGG GCCCAAGGGG
TTCGCCGCGG TGGTCTACGG GTTGCTCGTG CTGCAATCCG GTATCCCCGC GGCGGACACC
ATCTTCCATC TGGTCGCCCT GACGATCACC CTGTCGATTG TGGCCCACTC CTCCACGGAC
GTGATCATCG CCCGCCGGTT CGAGGAACCG GAAAGCAGCC GCCCCACCGC CGACGACGGC
TGA
 
Protein sequence
MAGMDALLLV FAVTLLVAVL VSDLAQRTIL STAVLFLLVG IVCGDGVLGL VPLTPDSPIV 
ATLAQQALFW VLFTDGMRVG WSDLRAAWRL PGRALLLGLP LTVALTAALA AWLVGLSWPE
ALLIGAVLAP TDPVFAAALV GNERVPGRLR QLLNVESGIN DGLALPLVLI FLAMSGDADA
QPASGTLLAE LVGGVAIGVF VPYLAVRLEG SRLFSASARY QPLTAIAIGL LILGICLATE
ANLYLAAFSA GITIASCGPH QRESFEPIGE LIAELLKLAA LLVFGALISP AFLAEIPFGG
WIFAALAIIL ARPAALAVSF LGSSLTRRER WTAFWFGPKG FAAVVYGLLV LQSGIPAADT
IFHLVALTIT LSIVAHSSTD VIIARRFEEP ESSRPTADDG