| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2572 |
|---|
| Symbol | |
|---|
| ID | 8448184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2821241 |
|---|
| End bp | 2823745 |
|---|
| Gene Length | 2505 bp |
|---|
| Protein Length | 834 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645041672 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003201915 |
|---|
| Protein GI | 258652759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0240201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00088706 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TTGTTGTCGG CGGCGTGGCG GCGGGCATGT CATGCGCGGC GCGGGCCCGG
CGGCTGGATG AGTCCGCCGA GATCGTGGTG TTCGAGCGGG CGAATCATGT GTCGTTCGCC
AACTGCGGTT TGCCGTATCA CATCGGCGAG GTGATCAAGG ACCGCAGCCG GCTGCTGCTG
CAGACCCCGC AGAGCTTGCA CGAGTCGTTG GCGATCGACG TGCGCATCGC CACCGAGGTT
CTCGCCATCC GCCCCGACCG CAAGTCCGTG ACCGTCCGGG ACCTCGACAG CGGGCGCGAG
TACGAGGAGC CGTACGAACA GCTCGCGTTG TGCCCCGGGG CGTCGCCGAT CACGCCGCCA
CTGCCCGGGG TCGACCATCC CGACATCCAC GTGTTGCGCC GGATCGGCGA CATGGACGTG
ATCAAGGCCG CGGTCGACGG GCGGAGCGCG TCGGGCCGGC CACCCATCAC GCACGGGGTG
GTGATCGGCG CGGGGTACAT CGGCCTGGAA ATGGCGGAGA ACCTGCACGA GCGCGGCGTG
CAGGTCGTGG TCGTCGAGAT GGCCGACCAG ATCATGCCGC CGCTGGACCG TGAACTGACC
ACCACCATGG AGAGCTACAT CCGGGCCCAC GGCGTCGAGC TGCGGCTGGG CACCCAGGCG
GCCGCATTCA GCCGGTCTCC CGGCGGCTGG CTACGGGTCG AACTGACGAA CGGCGAATTC
GTCCAGACCG ACCTGGTCCT GCTCGCCGCC GGGGTGCGGC CCAGCACCGA ACTCGCGGTC
GCGGCCGGCA TCGACCTCGG ACCGCGGGGC GGCATCAAGG TCGACGCGCA CATGCGGACC
AGTGTCCCCG GCATCTACGC CGCCGGCGAT GCGATCGAGG TCGAACATCT GGTGCTGCCC
GGGACCTGGC TGATCCCGCT GGCCGGGCCG GCGAACCGGC AGGGCCGGGT GGCCGCGGAG
AACATGTGCG GCCGGGACAC GGTGTTCGAC CCGGTGCAGG GCACCTCGAT CGTGAAGGTG
TTCGACATGG TCGCCGGCGG CACCGGTGCG AACCAGCGGC AGCTGGATGC GGCCGGAGTG
CCGTACGAGC GGGTGCAGAT CCATCCGTCC GGGCACGCCG GCTATTACCC GGGCACCGCG
AAGATGCAGC TCAAGGTGCT GTTCGAACCG GTGACCGGCA AGCTGCTGGG CGCCGGCATC
GTGGGCTTCG ACGGGGTCGA CAAGCGGCTC GACGTGCTGG CCACGGCGCT GCGTGGCGGG
ATGACGGTGC ACGACCTGGA GGGTCTCGAG CTGGCCTACG CGCCGCCGTT CGGGTCGGCC
AAGGACCCGA TCAACATGGC CGGGTTCGTG GCCGCCAACC TGCTGAAGAA GGACCTGCGG
TTGTGGTACC CCAGTGAATA CCCGGGGGCC ACCGATGGTG CTCGGATCAT CGACGTTCGG
GGTCCTCAGG AGTACGCGAT CTGGCATCTG CCCGGCGCGG AGAACGTCCC GCTGCCGACC
CTGCGGGAGG CCCAGCAGGA CTGGGACCGG AGCCGGCCGA TCCGGCTCTA TTGCGCGGTC
GGGTTCCGCA GCTACCTGGC CTACCGGGCA CTGGTGCAAC GCGGCTTCAC CGATGTGCGG
ACCCTGTCCG GCGGGATGAC GACCTTCCGC TCCTACCATG ATGTCCCGTC CGCGGAGAGC
GTCGACACCA TCGAGCCGGT GGTCAACTAC GGCGAGGACC GCACCGGCAT CAACGCCGTG
CGGGTGACCG CCGCCGGGCC GGTCGCGGCC ACCGGAGTAT TGGTGGACCT GGACTGCACC
GGCCTGGCCT GCCCCGGACC GATCATGGCG TTGCAGGCCA GGATGGCCGA GCTCGCCCCG
GGCGACGAGG TGCTGGCCCA CGTCTCCGAC CCCGGGTTCC GGCTCGACGC CCCGGCGTGG
GCGGCCAAGA ACGGTCACTC GATGCTGGAG CTGGTGCCCG AGGGACCCGG CTACGCCGCC
CGGTTCCGCA AGGGCGGTAT CGGGATCGTC CCCGGCGGCC CGGCCGCCCG GCTGAAGGAC
AAGAAGTCGT TCGTGGTGTT CTCCGGCGAG TTCGACCGGG TGCTGGCCTC GTTCATCCTG
GCCAACGCCG CCGCGTCGAT GGGCGACGAG GTGTCGATGT TCTTCACCTT CTGGGGTCTC
AACGCGCTGC GTCGGCTGGA CCCGCCGACC CGCGAGAAGA ATGCGCTGGA CCGGGCGTTC
TCGGCCGTCC TGCCGTCGGG GCCGGACAGC CTGCCGCTGT CCACGATGAA CATGTTCGGG
GGTGGACCGG CGCTGATCAA GAAGATCATG AAGGATCACC ACGTGCCGAG CCTGCCCGAG
CTGATCGCTT CCGCGCAGCA GACCGGGGTG CGGTTGATCG CCTGCACGAT GACCATGGAT
CTGTTGGGCA TCGCCCATGA GGACCTGATC GACGGCGTCG AACTGGGCGG GGCGGCGATG
TTCTTCGGTG AGGCGAACGA GTCCAACGGG GCGTTCTTCA TCTGA
|
|---|
| Protein sequence | MKIVVVGGVA AGMSCAARAR RLDESAEIVV FERANHVSFA NCGLPYHIGE VIKDRSRLLL
QTPQSLHESL AIDVRIATEV LAIRPDRKSV TVRDLDSGRE YEEPYEQLAL CPGASPITPP
LPGVDHPDIH VLRRIGDMDV IKAAVDGRSA SGRPPITHGV VIGAGYIGLE MAENLHERGV
QVVVVEMADQ IMPPLDRELT TTMESYIRAH GVELRLGTQA AAFSRSPGGW LRVELTNGEF
VQTDLVLLAA GVRPSTELAV AAGIDLGPRG GIKVDAHMRT SVPGIYAAGD AIEVEHLVLP
GTWLIPLAGP ANRQGRVAAE NMCGRDTVFD PVQGTSIVKV FDMVAGGTGA NQRQLDAAGV
PYERVQIHPS GHAGYYPGTA KMQLKVLFEP VTGKLLGAGI VGFDGVDKRL DVLATALRGG
MTVHDLEGLE LAYAPPFGSA KDPINMAGFV AANLLKKDLR LWYPSEYPGA TDGARIIDVR
GPQEYAIWHL PGAENVPLPT LREAQQDWDR SRPIRLYCAV GFRSYLAYRA LVQRGFTDVR
TLSGGMTTFR SYHDVPSAES VDTIEPVVNY GEDRTGINAV RVTAAGPVAA TGVLVDLDCT
GLACPGPIMA LQARMAELAP GDEVLAHVSD PGFRLDAPAW AAKNGHSMLE LVPEGPGYAA
RFRKGGIGIV PGGPAARLKD KKSFVVFSGE FDRVLASFIL ANAAASMGDE VSMFFTFWGL
NALRRLDPPT REKNALDRAF SAVLPSGPDS LPLSTMNMFG GGPALIKKIM KDHHVPSLPE
LIASAQQTGV RLIACTMTMD LLGIAHEDLI DGVELGGAAM FFGEANESNG AFFI
|
|---|
| |