Gene Namu_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2500 
Symbol 
ID8448111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2755149 
End bp2756708 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content74% 
IMG OID645041612 
Productamine oxidase 
Protein accessionYP_003201856 
Protein GI258652700 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00015741 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0084988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAGC AGAACGAGCG TGGCCGGTGG CGGCCGGGTC GCGACCGGAT GGCCGTGTGG 
CACCCGGTCG GTGACGGGTC CGCGCGGGTG CCGGCCCCGG CCCCCCGGGT GCTCGTGGTC
GGTGGCGGCA TCGCCGGCCT GGCCGCGGCC ACCGGATTGG CCGAGCGCGG GGCCCGGGTC
GTGCTGGCCG AACAGCATCC CCAGCTCGGC GGCCGGGTCC GCTCCTGGCC GGTGACCCAC
GGCGAGGACC GGGTCACGAT GAGCCGTGGG TTCCACGCGT TCTTCCGCCA GTACTACAAC
CTGCGGACCC TGCTGCGGCG GGTCGACCCC ACCCTGGCCG GGCTGACCCG CGTGGCGGAC
TACCCGGTGG CGATGGCCGA CGGGGCGGCG GACTCGTTCG CCCGGGTGCC GCGGACGCCG
CCGGTGAACC TGCTCTGGTA CGCCCTGCGC AGCCCCAACT TCGGGCCGCG CGCGTTGCTC
AAGGCGGACA TCGCCGCCTC GTCCCGGATG CTCGACCTGG ACTTCCCGCA GGCCTTCGAC
GACTTCGACC AGCTGAGCGC CGCGGCCTTC CTGGACGAGC TGAACTTCCC GCCGGCGGTC
CGGCACCTGG CGTTGGAGGT GTTCACCCGG AGCTTTTTCG CCGACCCCAC CGAGTACGCC
GCGGGTGAGC TGCTGGCGAT GTTCCACCTG TACTTCGTCG GCTCCTCCGA GGGCCTGCTC
TTCGACGTCG CGACCGACGA CTTCGGCACG GTGTTCTGGG ATCCGCTGCA GCGACATCTG
GTGGGCCGCG GGGTCGACGT GCGCACCGGG GTACGGGTCG AGGACCTGCG TTTCCGGGCG
GAGGGTGGGG TGCGGGCCGC CTTTGACGAC GCGAACGGCC GGGACCTGGA GGTCGATGCG
GTGGTGCTGG CCGCCGATCC GCGCAGCACC CGCCGGCTCG TCGCCGAGGC CACCGGCCTG
GCCGATGACC GGTGGCGGGC ATCGCTGGCC ACGACGGGCA ACGCGCCGCG CTTCGTGGTG
TGGCGGCTGT GGCTGGACCG GCCGGTCCGG GCCGACCGGC CGGCGTTCCT GGGCACGGGT
GGGTTCGAGC TGCTGGACAA CGTCTCGGTG CTGGAACGGT ACGAGGCCGG CGCCCGGCGC
TGGTCGACCG ACCACGGGGG ATCGGTGGTC GAGGTGCACG CCTACGCGAT CGATCAGGCC
CGCTCCGAGC AGTCGTTGCG AGAAGCGTTG CGGGACGAGC TGGCCGCGGT GTTCCCGGAG
ACCGGGGCGG CGACCGTGCT GGCCGACGAA TGGCTGGTCT CCGACGACTG CCCCTCGTTC
CGGCCCGGCG AGCGGCGGCA CCGGCCCGGG GTCCGCACTC CCGACCACCG CCTGGTGCTG
GCCGGCGACG GCGTGCGCTG CGATCTGCCG GTCGCGCTCA TGGAACGCGC GGCCACCACC
GGCTGGCTGG CGGCCAACGC GTTGCTGGCC GGGTGGGGCA CCCGCGGTCA CGACCTGTGG
TCGGTCCCGA TGTCCTCCCG GGTTCCCGCC CTGCGCCGGC TGCGCCGGCT GGTGGCCTGA
 
Protein sequence
MTQQNERGRW RPGRDRMAVW HPVGDGSARV PAPAPRVLVV GGGIAGLAAA TGLAERGARV 
VLAEQHPQLG GRVRSWPVTH GEDRVTMSRG FHAFFRQYYN LRTLLRRVDP TLAGLTRVAD
YPVAMADGAA DSFARVPRTP PVNLLWYALR SPNFGPRALL KADIAASSRM LDLDFPQAFD
DFDQLSAAAF LDELNFPPAV RHLALEVFTR SFFADPTEYA AGELLAMFHL YFVGSSEGLL
FDVATDDFGT VFWDPLQRHL VGRGVDVRTG VRVEDLRFRA EGGVRAAFDD ANGRDLEVDA
VVLAADPRST RRLVAEATGL ADDRWRASLA TTGNAPRFVV WRLWLDRPVR ADRPAFLGTG
GFELLDNVSV LERYEAGARR WSTDHGGSVV EVHAYAIDQA RSEQSLREAL RDELAAVFPE
TGAATVLADE WLVSDDCPSF RPGERRHRPG VRTPDHRLVL AGDGVRCDLP VALMERAATT
GWLAANALLA GWGTRGHDLW SVPMSSRVPA LRRLRRLVA