| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2493 |
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| Symbol | |
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| ID | 8448104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2748994 |
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| End bp | 2750547 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041605 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003201849 |
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| Protein GI | 258652693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000001804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00137453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACAC CCCCACCGGT GGGCGGCTCG CCGGCCACCA CCGCCCCGGT CTCCCCCGTC
CCCCTGCCGC CCGCCGACGG CGCGCCGGCC GGGCCGCCGG CCGGCCGGTT CTACCCATCG
CTGCGCGCGG CCTGGATTCC CTTGGCCGCA CTGTGTCTGG CGTTCTTCGT GGAGATGGTC
GACAACACCC TGCTGACCGT CGCCCTGCCG ACGATCGGCC GGGACCTGCA GGGCAGCACC
ACCTCGCTGC AGTGGATCAC CGGCGCCTAC TCGCTCACCT TCGGCGGGCT GCTGCTGACG
GCCGGCTCGA TCGCCGACCG GTTCGGTCGC CGGCGGGTCC TGCTCCTGGG CCTGTCGGCG
TTCGGCCTGA TGAGCCTGGC CGTCGTCGCG GTGACCACCA CCGGCGAACT CATCGCCCTG
CGGGCCGGGC TGGGCATCGC CGCCGCCGCC ATGGCGCCGA TCACCAACTC GCTGGTGTTC
CGGCTGTTCG ACGACGACGC GCTCCGGCGG CGGGCGATGA CGGTGATGAT CGTCGTCGGG
ATGAGCGGTT TCATCCTCGG GCCCCTCATC GGGGGCTCCG CCCTGGCTCA CGTCGGCTGG
CAGTGGCTGC TGCTGGTCAA CGCGCCGATC GCCCTGATCG CCGCCGTCGG CGTGCGGCTG
GGCGTGGCCA AGGACCACCC CGACGATCTC ATCGCCGACC CCCTGGACCT GCCGGGCGCG
GCGCTGACCA TCCTGGCCAT CGGGCTGGGC TGCTACACGC TGACCAGCGG TATCGAGCAC
GGTTGGGTGT CCCTGCCGAC CCTGCTCTCG GCCGCCGGGG CGATCGCTTC CGTGATCGGC
TTCGTGGTGC GCGAGCGTCG CACCGCCTTC CCCATGCTGG ATCTGCGGTT GCTGCGCCAC
CCCGTCGTGC GTGGTGCGAC CGTGGCCCAG CTGGGCACGG CCATCGCCAT GGCCGGCGTG
ATGTTCAGCC TGGTCCTGCA TTTCCAGTTC GCCTACGGCT GGAGCCCGAT GGTCGCCGGC
CTGGCCAACC TGCCGTTCAT CGTCACCATG CTGGCCGCCA CCCCGCTCAC CGAGTACCTG
GTCACCCGGT TCGGCCGCCG GATGGCCTGC CTGGTCGGCG CGGGTGCGCT GACCGTGGGT
CTGGCCTGGC TGGCCTGGGC GGTCGACCAC GGGTACCTGG CGATCGCCGC CGGCATGGTG
GTGATGACCT TCGGGCTGCG CACCGTCATG ACGATCTGCG CGGTCGGCCT GGTCGACGCC
ATGCCGGAGA ACCGCACGTC GTTGGGGGCC GCCCTCAACG ACACCGCTCA GGAGGTCGGC
TCCAGCATCG GCACCGCCCT GGTCGGCACG TTGATCGCCG CGCTCGTGGT CACCGTCCTG
CCGCTCGGCG CGTGGAGCCC GGAGCTGGTC GACTCGTACT TCCACGGCGA GCGGATCGCC
TACCTGGTGC TCACGGTGCT GGTCGGTACG GTGGCCTTCC TCGGGGCCGC GACCCTGGAC
GACTCGCACC GTCCCGAGCA GCTGGCCGAC GAGCAGCTCG AGTCGCCGGC CTGA
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| Protein sequence | MTTPPPVGGS PATTAPVSPV PLPPADGAPA GPPAGRFYPS LRAAWIPLAA LCLAFFVEMV
DNTLLTVALP TIGRDLQGST TSLQWITGAY SLTFGGLLLT AGSIADRFGR RRVLLLGLSA
FGLMSLAVVA VTTTGELIAL RAGLGIAAAA MAPITNSLVF RLFDDDALRR RAMTVMIVVG
MSGFILGPLI GGSALAHVGW QWLLLVNAPI ALIAAVGVRL GVAKDHPDDL IADPLDLPGA
ALTILAIGLG CYTLTSGIEH GWVSLPTLLS AAGAIASVIG FVVRERRTAF PMLDLRLLRH
PVVRGATVAQ LGTAIAMAGV MFSLVLHFQF AYGWSPMVAG LANLPFIVTM LAATPLTEYL
VTRFGRRMAC LVGAGALTVG LAWLAWAVDH GYLAIAAGMV VMTFGLRTVM TICAVGLVDA
MPENRTSLGA ALNDTAQEVG SSIGTALVGT LIAALVVTVL PLGAWSPELV DSYFHGERIA
YLVLTVLVGT VAFLGAATLD DSHRPEQLAD EQLESPA
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