Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2471 |
Symbol | |
ID | 8448082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2726594 |
End bp | 2727529 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645041584 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003201828 |
Protein GI | 258652672 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000518709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0153728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTCAC GGGGACGACC GGGTCCCGAT CCGGCCACGC CGTTGACCGG TCGTTCCCCG GCCAGCGAAA TCGTGGTGCC CGATCTGGAG AGCAGCGTCC GATGGCACCA GCACGATTTC CCGCACCCGT TGGCGCGGTG GCACACCCAT CCCGAGGTGG AAGTGCACCT GATCCGTCGG AGTACCGGAC TCGCCTTCGT GGGCGATTAC ATCGGACCGT TCGGTCCCGG GCATTTCGTG CTGGTCGGGT CACAATTGCC GCACAATTGG TTGTCCGATC TCGAGCCCGA CGAAATGGTC GCGGGTCGCG ACGTGGTCCT GCAGATCCAT CCCGAGCTGG TTGGCCGGCT GGCCCTGGTG CTGCCCGAGG CGGCGGAAGC AGTCAACCTG TTCCAGTCGG CCAACCGCGG AATCGAATAC TCCGGGGCAA CTGCCCGGCA GGCGGCCGTC GAACTCGAAG GCGTCGGCCA GAGCAGTGGC CTGCAACGGC TGCAACGGAT CTTCGGGCTG CTGAGCCTGC TCGCCCGGGC CCCTGGGGCC GAGCAGCGGC CACTGTCCCA AGCCACCGCG GCCGTCCCGC TCGATGCCCC CGGGCAGCGC AAGGTCGACG CCGTGCTGCG CTACATCACC GACAACCTGG CGGGCGAGGT CCGGCTCGAG GAGGCCGCCC GCACCGTCGG GATGACTCCG TCGGCCCTGT CCCGCTTCTT CACCCGCGCC GCCGGCCGCG GCTTCGCCGA CACCGTTCGC CGCCTGCGGG TGATCCGGGC CTGCACCCTG CTGTTCCAGA CCGACCGACC GATCGCCGAC ATCTGCTTCG AGGCCGGATA TCAGAACCTG TCGAACTTCA ACCGTCAGTT CCGGACCGAG ACCGGCCTGA CGCCCCGCGA GTACCGGCGC CGGCTCCGCG TCGGAACCCG GCTGCCGCCG GCCTGA
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Protein sequence | MPSRGRPGPD PATPLTGRSP ASEIVVPDLE SSVRWHQHDF PHPLARWHTH PEVEVHLIRR STGLAFVGDY IGPFGPGHFV LVGSQLPHNW LSDLEPDEMV AGRDVVLQIH PELVGRLALV LPEAAEAVNL FQSANRGIEY SGATARQAAV ELEGVGQSSG LQRLQRIFGL LSLLARAPGA EQRPLSQATA AVPLDAPGQR KVDAVLRYIT DNLAGEVRLE EAARTVGMTP SALSRFFTRA AGRGFADTVR RLRVIRACTL LFQTDRPIAD ICFEAGYQNL SNFNRQFRTE TGLTPREYRR RLRVGTRLPP A
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