Gene Namu_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2471 
Symbol 
ID8448082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2726594 
End bp2727529 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID645041584 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003201828 
Protein GI258652672 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000518709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0153728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCAC GGGGACGACC GGGTCCCGAT CCGGCCACGC CGTTGACCGG TCGTTCCCCG 
GCCAGCGAAA TCGTGGTGCC CGATCTGGAG AGCAGCGTCC GATGGCACCA GCACGATTTC
CCGCACCCGT TGGCGCGGTG GCACACCCAT CCCGAGGTGG AAGTGCACCT GATCCGTCGG
AGTACCGGAC TCGCCTTCGT GGGCGATTAC ATCGGACCGT TCGGTCCCGG GCATTTCGTG
CTGGTCGGGT CACAATTGCC GCACAATTGG TTGTCCGATC TCGAGCCCGA CGAAATGGTC
GCGGGTCGCG ACGTGGTCCT GCAGATCCAT CCCGAGCTGG TTGGCCGGCT GGCCCTGGTG
CTGCCCGAGG CGGCGGAAGC AGTCAACCTG TTCCAGTCGG CCAACCGCGG AATCGAATAC
TCCGGGGCAA CTGCCCGGCA GGCGGCCGTC GAACTCGAAG GCGTCGGCCA GAGCAGTGGC
CTGCAACGGC TGCAACGGAT CTTCGGGCTG CTGAGCCTGC TCGCCCGGGC CCCTGGGGCC
GAGCAGCGGC CACTGTCCCA AGCCACCGCG GCCGTCCCGC TCGATGCCCC CGGGCAGCGC
AAGGTCGACG CCGTGCTGCG CTACATCACC GACAACCTGG CGGGCGAGGT CCGGCTCGAG
GAGGCCGCCC GCACCGTCGG GATGACTCCG TCGGCCCTGT CCCGCTTCTT CACCCGCGCC
GCCGGCCGCG GCTTCGCCGA CACCGTTCGC CGCCTGCGGG TGATCCGGGC CTGCACCCTG
CTGTTCCAGA CCGACCGACC GATCGCCGAC ATCTGCTTCG AGGCCGGATA TCAGAACCTG
TCGAACTTCA ACCGTCAGTT CCGGACCGAG ACCGGCCTGA CGCCCCGCGA GTACCGGCGC
CGGCTCCGCG TCGGAACCCG GCTGCCGCCG GCCTGA
 
Protein sequence
MPSRGRPGPD PATPLTGRSP ASEIVVPDLE SSVRWHQHDF PHPLARWHTH PEVEVHLIRR 
STGLAFVGDY IGPFGPGHFV LVGSQLPHNW LSDLEPDEMV AGRDVVLQIH PELVGRLALV
LPEAAEAVNL FQSANRGIEY SGATARQAAV ELEGVGQSSG LQRLQRIFGL LSLLARAPGA
EQRPLSQATA AVPLDAPGQR KVDAVLRYIT DNLAGEVRLE EAARTVGMTP SALSRFFTRA
AGRGFADTVR RLRVIRACTL LFQTDRPIAD ICFEAGYQNL SNFNRQFRTE TGLTPREYRR
RLRVGTRLPP A