| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2446 |
|---|
| Symbol | |
|---|
| ID | 8448057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2698345 |
|---|
| End bp | 2699283 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645041561 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003201805 |
|---|
| Protein GI | 258652649 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000102431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0111256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTGCG CCTACATCGA CGCGCACAAG CATCGTTTCG GGGTCGAGCC GATCTGCCGG
GTGTTGTCCG AGCACGCCAT GCCGATCGCC CCGAGCAGCT ACTACGCGCA CCGCCGCCGG
CCGGTCAGCC CTGCGCTGCG GGCCGAGGCG GAGCTGGTCA ACACCGTCAT CGACCTGCAC
CGTGAGCACC ACGGCCTGTA CGGGGTGCGC AAGATGTGGC ATCTGATGAC CCAGGAAGGG
CACTTGGTCG GCCGGGACCA GGTCGCCCGA TTGATGACCA TCGCCGGGCT GCGGGGTGTG
CGCCGCGGCG ACCACCGCAC CACGACGACC CGCCGCCGCG CCGCCGACGA CCGGCCCCGG
CCGGCGGACC TGATCAACCG GGACTGGGCG GCGCCGACCC GGCCGGACCA GTGGTGGGTC
GCGGACTTCA CCTACGTCTG GACCCCGGCC GGGTTCTGCT ACGTGTCCTT CGTGGTGGAC
GTGTACTCCC GCCGGATCCT GGGCTGGCGG GTCGCCTCGT CGATGACGAC CGCACTGGTC
GCCGCCGCCC TCGATCAGGC CCTGTTCACC CGGCGCCGCA CCGATACCCG TTTCACCTCA
ACTGGTCTGG TTCATCACTC GGATGCCGGG TCGCAATACA CGTCAATCGC CTACACCACC
GCGCTGGTCG ATGCCGGGAT CGCGCCGTCG ATCGGTTCGG TCGGGGATGC CCTGGACAAC
GCCCTCATGG AATCGACCAT CGGCCTGTAC AAGACAGAGC TGATCGACCG GCATCAACGG
TCCTGGCCCA GCCCGCAGCA GGTCGAAACC GCGACCGCCG GCTGGGTGCA CTGGTTCAAT
ACCCGCCGAC TGCACTCCTC GATCGACTAC CTGCCACCCG TCACCTACGA GCAGCTGTAC
CGTCAGCAGA CCAGCACCCC GACCGGGAAG GCTGCGTAA
|
|---|
| Protein sequence | MICAYIDAHK HRFGVEPICR VLSEHAMPIA PSSYYAHRRR PVSPALRAEA ELVNTVIDLH
REHHGLYGVR KMWHLMTQEG HLVGRDQVAR LMTIAGLRGV RRGDHRTTTT RRRAADDRPR
PADLINRDWA APTRPDQWWV ADFTYVWTPA GFCYVSFVVD VYSRRILGWR VASSMTTALV
AAALDQALFT RRRTDTRFTS TGLVHHSDAG SQYTSIAYTT ALVDAGIAPS IGSVGDALDN
ALMESTIGLY KTELIDRHQR SWPSPQQVET ATAGWVHWFN TRRLHSSIDY LPPVTYEQLY
RQQTSTPTGK AA
|
|---|
| |