Gene Namu_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2429 
Symbol 
ID8448040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2678801 
End bp2679448 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID645041547 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_003201791 
Protein GI258652635 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000018404 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00249588 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCC GTCTGGACCT ACCCCCTGCC GTCAGCGCGT CCGGTGTCGT CGCCGTGCTG 
CGTGCGGCGC ACGCCGACCG CTATCCCCCG GTGGTCGAGG TGCTCGCCGA GAACGGCGTG
CACGCCATCG AAGTGACCAT GAGTACGCCC GGCACGCTGG ACGCGGTCGA GGTCCTGCGC
GCCCGGATCT CGGGCAGTGG CGCCGCGGTG GGCGTGGGCA CCGTCACCGA CGCCGACACC
GCCCGTCGGG TGGTCGAGGT CGGCGGGGAG TTCGTCGTGA CCCCCACCAC CGATCCCGAG
GTCATCCGAA TCGCGGTCGA GGCGGGCATT GCCGTCTACC CGGGGGCGCT GACCCCCACC
GAGGTGCTCG CCGGGTGGCG GGCCGGCGCC ACCGCCGTCA AGCTGTTCCC GGCCTCGACC
GTGGGACCGG CCTACCTGGG GCACCTGCGT GGTCCTTTCC CGCAGATCCC GATCCTGCCG
TCCGGCGGCT TCGGTGTCCC CGAGATTCCC GAGTGGATCG GCGCCGGTGC GGTGGCCGTG
AGCATGGGCT CCTCGCTGAT CGGCGACGCC CTGCGCGGCG GCAGCCTGAC CGACCTGGCC
CGTCGTTGCC GCGACGCGGT CGACGCCGTC CGCAAGGCCC GGTCGTGA
 
Protein sequence
MPTRLDLPPA VSASGVVAVL RAAHADRYPP VVEVLAENGV HAIEVTMSTP GTLDAVEVLR 
ARISGSGAAV GVGTVTDADT ARRVVEVGGE FVVTPTTDPE VIRIAVEAGI AVYPGALTPT
EVLAGWRAGA TAVKLFPAST VGPAYLGHLR GPFPQIPILP SGGFGVPEIP EWIGAGAVAV
SMGSSLIGDA LRGGSLTDLA RRCRDAVDAV RKARS