Gene Namu_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2423 
Symbol 
ID8448034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2674136 
End bp2675179 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID645041541 
Producttransport system permease protein 
Protein accessionYP_003201785 
Protein GI258652629 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00075804 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0291277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCG GTCCCCTCGT CTCGACGCCT GCCGTGGCTG GTACCGGGAT CGGCGGTGGG 
CGCGGGGTGC TCACCGTTGC GGTCGGGGTG GGCCTGCTGG CCCTGCTCAC GGTGGCCAGC
GTCTTCATCG GGTCGGGCGA TATTCCGGTC GCCGATGTGT GGGCCGCACT GCAGCAGGAT
TCCGGCCGCT CCACCGATTT GATCGTGCGG CAGTTCCGGA TTCCTCGCAC CCTGCTGGCC
ATCGTGGTCG GCATTGCACT CGGCCTCGCC GGCGCGATCA TCCAACCGCT CACCCGCAAC
CCGCTGGCCG ACCCGGGCAT CCTCGGCGTC AACGCCGGCG CCTATGCCGC GGTGGTCGGG
GCCGCCGCCA TCCTCGGATC CTCGATGACG ACCGTCCTCG TCGGCTTCGC GATGATCGGC
GCCCTGGTGG CGGCGGTGAT CGTCTACGGC GTCGGCACCA CCGGGCCGGC CGGCGGGACC
CCGACCAGAC TCGTACTCAC CGGTGTCGCC CTCGGCGCGG TGCTGACCGG GATCAGCTTC
GCCGTCACCC TGGTCAAACC CGAGGTCTTC GATCGGGTGC GATTCTGGAG CGCCGGGTCG
TTGCAGGGAC GTCAGTTCGA CACGCTCTGG GCCGTCCTGC CGTTCATCGT GCTGGGCACG
ATCATCGCGC TGCTGCTGCC CCGGGCCCTG AATGCGCTGT CGCTGGGTGA GGACCTGGCC
GTGTCCCTGG GGTCCCGTCC GGGGACCACC AAGCTGGCCG GAGTCCTCGC CGTCACCCTG
CTCTGCGGCG CGGCCACCGC CGCGGCCGGG CCGATCGCGT TCGTCGGGCT GATGGTGCCG
CATGTGCTGC GCGCCATCGT GGGTCCCGAC CAGCGCTGGA TCATCCCGCT GAGCCTGCTG
GCCGCCCCCG TGCTCCTGCT CACCGCGGAC ATCCTCGGCC GGGTCGTGGT CTCCGCCGAA
CTGCCGGTCG GCGTCGTCAC AGCGTTCCTC GGGGCGCCCG TGCTCATCGC CCTGACCCGG
CGCAAGGGGG TCCGCGGGCT GTGA
 
Protein sequence
MAAGPLVSTP AVAGTGIGGG RGVLTVAVGV GLLALLTVAS VFIGSGDIPV ADVWAALQQD 
SGRSTDLIVR QFRIPRTLLA IVVGIALGLA GAIIQPLTRN PLADPGILGV NAGAYAAVVG
AAAILGSSMT TVLVGFAMIG ALVAAVIVYG VGTTGPAGGT PTRLVLTGVA LGAVLTGISF
AVTLVKPEVF DRVRFWSAGS LQGRQFDTLW AVLPFIVLGT IIALLLPRAL NALSLGEDLA
VSLGSRPGTT KLAGVLAVTL LCGAATAAAG PIAFVGLMVP HVLRAIVGPD QRWIIPLSLL
AAPVLLLTAD ILGRVVVSAE LPVGVVTAFL GAPVLIALTR RKGVRGL