Gene Namu_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2312 
Symbol 
ID8447923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2553292 
End bp2554713 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID645041433 
Productband 7 protein 
Protein accessionYP_003201677 
Protein GI258652521 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00180673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000141748 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGTCG CACTGATCGT CGCACTCGTC GTCGCCATCT TGGTGATCGT GGTGCTGGTC 
CGGTCGGTCA AGGTGATCCC GCAGGCCCAG GCCGCGGTGA TCGAGCGCCT CGGCCGGTAC
AACAAGACCG GCAGCGCCGG TCTGGTCTGG CTGATCCCGT TCCTGGACCG GATCCGGGCC
CGGATCGACC TGCGGGAGCA GGTCGTTTCC TTCCCGCCGC AGCCGGTCAT CACCGAGGAC
AACCTGACCG TCTCCATCGA CACCGTCGTC TACTTCCAGG TCACCGACCC GCGGGCGGCG
GTCTACGAGA TCGCCAACTA CATCGTGGCC GTCGAGCAGC TGACCACCAC CACGCTGCGC
AACGTGGTCG GTGGGATGAA CCTGGAACAG ACCCTGACCA GCCGCGACTC GATCAACGGG
CAGTTGCGCG GGGTGCTGGA CGAGGCCACC GGCAAGTGGG GCATCCGGGT CGCCCGGGTC
GAGCTCAAGG CGATCGACCC GCCGCCGTCG ATCCAGGAGG CGATGGAGAA GCAGATGCGC
GCCGATCGGG ACAAGCGCGC GATGATCCTG AACTCCGAGG GCCAGCGGGA GTCGTCGATC
AAGACGGCCG AGGGGCAGAA GCAGGCCGCG GTGCTCTCCG CCGAGGGGGC CAAGCAGGCC
GCCATCCTGT CCGCCGAGGG CGAGCGGCAG TCCCGCATCC TGCGCGCCCA GGGTGAGCGG
GCCGCCCGTT TCCTGCAGGC GCAGGGCCAG GCCAAGGCGA TCGAAAAGGT CTTCGCCGCC
GTCAAATCGG CCAAGCCGAC GCCGGAACTG CTGGCCTACC AATACCTGCA GACCCTGCCG
CAGATGGCGC AGGGTGATGC GAACAAGGTT TGGCTCATTC CCAGCGATTT CAACAAGTCG
CTCGAGGGCT TCGCCCGGAT GCTGGGCACC AAGGGTGACG ACGGGGTCTT CCGGTACGAA
CCGCCCAAGG AGGAACCGGC CGATCCGGAC AACCCCAAGC CGCGGCCGGG GGACATCGAC
GACGACGTGG CCGACTGGTT CGAGGGCACC TCGGCTCAGG AGGTCGCCGC CGCCGTCGCC
AAGGTCGAGC AGGAGGCCGC GCTGACCATC GCCGACCAGG AGGCGGCCCG CATCGCCGCC
TACCGCGGCG AGGTCGGCCC GCCGGAGCGC CCGGCGATCT CCACCGGCAA GACCGCCGAC
CCGGACGACG AACGGGCCGC GCAGCCGCAG TCGGCGTCCG GACAGCAGCC CCCGGCCCAG
CAGCAGCGTC CGCCGCAACA ACCGGGCTAT CAGGGCGGGC CGCCTCCCGG CCAGGGCCGC
CATCAGGGAC CGCCCCCGGG CTACCAACCG CCGCCGCCCG GGTACCAGCA GCCGCCGCCG
GGCTATCAGC CGCCGCCCGG CCAGTACGGG CCCGGGCGCT GA
 
Protein sequence
MDVALIVALV VAILVIVVLV RSVKVIPQAQ AAVIERLGRY NKTGSAGLVW LIPFLDRIRA 
RIDLREQVVS FPPQPVITED NLTVSIDTVV YFQVTDPRAA VYEIANYIVA VEQLTTTTLR
NVVGGMNLEQ TLTSRDSING QLRGVLDEAT GKWGIRVARV ELKAIDPPPS IQEAMEKQMR
ADRDKRAMIL NSEGQRESSI KTAEGQKQAA VLSAEGAKQA AILSAEGERQ SRILRAQGER
AARFLQAQGQ AKAIEKVFAA VKSAKPTPEL LAYQYLQTLP QMAQGDANKV WLIPSDFNKS
LEGFARMLGT KGDDGVFRYE PPKEEPADPD NPKPRPGDID DDVADWFEGT SAQEVAAAVA
KVEQEAALTI ADQEAARIAA YRGEVGPPER PAISTGKTAD PDDERAAQPQ SASGQQPPAQ
QQRPPQQPGY QGGPPPGQGR HQGPPPGYQP PPPGYQQPPP GYQPPPGQYG PGR