Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2292 |
Symbol | |
ID | 8447903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2529914 |
End bp | 2530474 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645041414 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003201658 |
Protein GI | 258652502 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.030142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00610108 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCCAAGG TCAGTCCCGA CCACCTGCGG GCGCGCCGGC AGCAGATCCT CGACGGCGCC CGCGCCTGTT TCGCCCGGCA CGGTTATGAG GGCGCAACGG TGCGGGTGCT GGAGGAGGAG ATCGGCCTGT CTCGTGGGGC GATCTTCCAT CACTTCGCCG ACAAGGAGGC GCTGTTCCTG GCGGTCGCGG AGCAGGACGC GGCCGCCATG CGGCAGACGG TGACCGAGCA CGGTCTGGTG CAGGTGATGC GCGAGATGAT CGCCGCACCG GACGCCGAAC GGATCGGGAC GCAGCTGGAG ATCGCTCGCC GGCTGCGGAC CGATCCGGCC TTCCGGGTCG CCTGGCAGCC GCAACTGGAC GAGCTGGGGG CGGCCGTGCG GGATCGGTTG CGCGGTCAAC GCCAGCTCGG CGCGCTCCGC GCGGACGCCG AGATCGACCA GGTGGCGAGC TATCTCGAGC TGGTCATGGA GGGTCTGACG GCCCACCTGG CGGCCGGCCT GCCGGCCGAC CGGCTGGAGC GGGTCCTGGA TCTGGTCGAA GGATCAGTCC GCCAGGGCTG A
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Protein sequence | MPKVSPDHLR ARRQQILDGA RACFARHGYE GATVRVLEEE IGLSRGAIFH HFADKEALFL AVAEQDAAAM RQTVTEHGLV QVMREMIAAP DAERIGTQLE IARRLRTDPA FRVAWQPQLD ELGAAVRDRL RGQRQLGALR ADAEIDQVAS YLELVMEGLT AHLAAGLPAD RLERVLDLVE GSVRQG
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