| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2288 |
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| Symbol | |
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| ID | 8447899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2524485 |
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| End bp | 2526866 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041410 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003201654 |
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| Protein GI | 258652498 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000426967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0053186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGAGC CCGACACCGA CCAGCAGATC GTCAGCCGCA TCGCCGGGGA ACTCAACGCC
CAGCCCTGGC AGGTGCAGGC GGCCGTCGCG CTGCTGGACG AGGGGGCCAC CGTCCCGTTC
ATCGCCCGGT ACCGCAAGGA GGTCACCGGC TCGTTGGACG ACGCGCAGCT GCGCGATCTG
ACCGAGCGGC TGGACTACCT GCGCGACCTG GCCGATCGCA AGAAGGCCGT GTTGGAATCC
ATTGCCGCGC AGGGCAAGTT GACCGACGCG CTGGCCGCGT CGATCCAGGC GGCGGACACC
AAGGCCCGGG TCGAAGACAT CTACCTGCCG TTCAAGCCCA AGCGGCGGAC CAAGGCCCAG
ATCGCCCGGG AGGCCGGCCT GGAGCCGCTG GCCGACGGCC TGCTCGGCGA TCCGCGGGTC
GACCCGGCGG CCGCGGCCGC GGCCTTCGTC GACCCGGACA AGGGGGTGGC CGACGGCGAC
GCCGCCCTGG CCGGGGCCCG CGCGATCCTG ACCGAGCGCT TCGGCGAGGA CGCCGATCTG
GTCGGTGAAC TGCGCGAGCT GCTGTGGCAG CGGGGCGGGC TGGTCAGCAC CGTGCGCGAC
GCCGGGCACG AGGACGCCGC CCGGTTCGCC GACTACCACG ACTTCTCCGA GTCGGTGAAA
TCCATGCCCT CGCACCGCAT TCTGGCGATG TTCCGGGGGG AGAGCACGGG CGTGCTCAGC
CTGGCCGTCG ACCCCGAGGC GGCCCCGGCC GATCCCACCG ATCCGACCGG CCCGGCCGTG
CTCTCGGACT ACGAGCGGCG CATCGCCGGC GCGTTTGGCA TCGCCGATCG GGGCCGGCCG
GCCGACCCGT GGTTGCTGGA CACCGTTCGC TGGGCCTGGC GCACCCGGAT CGTGGTGTCG
CTGGGCATCG ACGTGCGGAC CCGGCTGCGC CAGTCGGCCG AGGCCGATGC GGCCGCGGTG
TTCGCGGCCA ACCTCAAGGA CCTGCTGCTG GCCGCGCCGG CCGGCGGCCG GCCCACCCTG
GGCCTGGACC CGGGCTTTCG CACCGGGGTC AAGGTGGCGG TGGTGGACGG CACCGGCAAG
GTGCTGGCCA CCGACACGAT CTACCCGCAC CAGCCGGCCA ACCGGTGGGA CGCCGCGCTG
GCCAGCCTGC ACCGGCTGGT CACCACCCAC GGCGTCGAGC TGGTGGCCAT CGGCAACGGC
ACCGCGTCCC GGGAAACCGA CCGGCTGGCC GCGGATCTGG TCAAGCAGTG CCCGGGCCTG
ACCAAGGTCA TGGTGTCCGA GGCGGGCGCC TCGGTGTACT CGGCCTCGGC CTACGCCTCC
GGTGAGTTGC CCGACCTGGA CGTGTCGCTG CGCGGCGCGG TGTCCATCGC CCGCCGGTTG
CAGGATCCGC TGGCCGAGCT GGTCAAGATC GACCCCAAGT CCATCGGGGT CGGCCAGTAC
CAGCACGACA TTGCCGAATC GACGCTGACC CGTTCGCTCA ACGCCGTCGT CGAGGACTGC
GTCAACGCCG TCGGCGTCGA GGTCAACACC GCGTCCGTGC CGCTGCTCGC ACGGGTCTCC
GGGGTGACCA CCACGCTGGC CGAGAACATC GTCCGGCACC GGGACACCAA TGGCCCCTTC
ACCTCTCGGC AGGACCTCAA GCACGTCGCG CGCCTGGGCC CCAAGGCCTA CGAGCAGTGC
GCCGGGTTCC TGCGGATCCG TGGCGGCAGC GATCCGCTGG ACTCCTCGGG GGTGCACCCG
GAGGCCTACA CGGTGGTGCG GCGGATCCTC ACCCGCACCG GCGGCGACGT GCGGACCCTG
GTCGGCAACA CCACGGTGCT GCGCACGTTG CGGCCGCAGG AGTTCACCGA CGAGACCTTC
GGCGTGCCGA CGGTGACCGA CATCCTGGCC GAGCTGGAAA AGCCCGGCCG GGACCCGCGG
CCCGCGTTCA CCACCGCCAC CTTCGCCGAC GGCGTGGAGA AGATCGCCGA CCTGCGGGTG
GGCATGGTGC TCGAGGGCGT GGTCACCAAC GTCGCCGCCT TCGGAGCGTT CGTCGACGTC
GGGGTGCACC AGGACGGGCT GGTGCACGTC TCGGCGATGT CCCGGACGTT CATCAGCGAC
CCGCGCGAGG TCGTCACCTC CGGTCAGGTC GTCAAGGTCA AGGTGATGGC CGTGGACGAG
CAGCGCAAGC GGATCTCGTT GACCCTGCGG CTGGACGACG AACCGGGCGC GCCGGCGGCC
GGCCCCAAGG GGTCACGGCC GGCGCCGGCC CGGTCCGGCG GCGGCCGCCC GGCCAGCGGG
CAGCGGTCGG ACCGGGGCCG GCAGGGCGGG GCCCGGGGCG ATCGGCCGGC CCCCGGCGGG
GCGATGGCGG ACGCGTTGCG GCGGGCCGGA TTGGGCCAGT AA
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| Protein sequence | MTEPDTDQQI VSRIAGELNA QPWQVQAAVA LLDEGATVPF IARYRKEVTG SLDDAQLRDL
TERLDYLRDL ADRKKAVLES IAAQGKLTDA LAASIQAADT KARVEDIYLP FKPKRRTKAQ
IAREAGLEPL ADGLLGDPRV DPAAAAAAFV DPDKGVADGD AALAGARAIL TERFGEDADL
VGELRELLWQ RGGLVSTVRD AGHEDAARFA DYHDFSESVK SMPSHRILAM FRGESTGVLS
LAVDPEAAPA DPTDPTGPAV LSDYERRIAG AFGIADRGRP ADPWLLDTVR WAWRTRIVVS
LGIDVRTRLR QSAEADAAAV FAANLKDLLL AAPAGGRPTL GLDPGFRTGV KVAVVDGTGK
VLATDTIYPH QPANRWDAAL ASLHRLVTTH GVELVAIGNG TASRETDRLA ADLVKQCPGL
TKVMVSEAGA SVYSASAYAS GELPDLDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY
QHDIAESTLT RSLNAVVEDC VNAVGVEVNT ASVPLLARVS GVTTTLAENI VRHRDTNGPF
TSRQDLKHVA RLGPKAYEQC AGFLRIRGGS DPLDSSGVHP EAYTVVRRIL TRTGGDVRTL
VGNTTVLRTL RPQEFTDETF GVPTVTDILA ELEKPGRDPR PAFTTATFAD GVEKIADLRV
GMVLEGVVTN VAAFGAFVDV GVHQDGLVHV SAMSRTFISD PREVVTSGQV VKVKVMAVDE
QRKRISLTLR LDDEPGAPAA GPKGSRPAPA RSGGGRPASG QRSDRGRQGG ARGDRPAPGG
AMADALRRAG LGQ
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