| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2286 |
|---|
| Symbol | |
|---|
| ID | 8447897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2522163 |
|---|
| End bp | 2523743 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645041408 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase |
|---|
| Protein accession | YP_003201652 |
|---|
| Protein GI | 258652496 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0244087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00386241 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCGC GCCTGGCCCG CCGGTGGGCC GAGGTCCCCA CGCTGAGCCC GGCCGCCGTC
GCCGCGGACG GCGCGCGGGG CGCCGACGCC GAACTGGCCG CGGCCACCGA GGGGGCGTTC
CGGGACGACC TGGAACGAAT CCGGTTCTCC CCGTACTTCT CCCGCTTGGC CGCCGTCACC
CAGGTGATCT CCCAGGGGGC GTCCGGCCAG GTCGTGCACA ACCGGCTGAC CCACACGGTC
AAGGTCACCT CGGTGGCCCG GGCGATCGCC GTCGGGTTGC GCCGCGGTCC CTACGCGCAG
CTTGCCGACG ATCTCGGCGG CTGCGACGCG GTCGTCGTGC AGGCGGCGGC CAGCGCGCAC
GACCTGGGCC ACCCGCCGTT CGGTCATCTG GGGGAGCGGA TCCTGGACCG GATCGCCCGC
TCCCGGTTCG GCCTGGCCGA CGGTTTCGAG GGCAACGCGC AGACCTTCCG CATCCTGACC
GAGCTGGACG TGCACGGGGA GTCCGGCGAG GGACTGAACC TGACCGCGGC CGTGCGGGCC
GCCGTGCTGA AGTACCCGTG GTCGCGGCTG CACGTGCCCG ACCCGCACCC GAGCACCTTG
GCCCAGCCGC CCCGCGGCGG CGGGCCCGGG GAAGAGGGGG CCGGGTCGGG CAAGTACTCG
GCCTACGTGC TCGACGTCGG TGAGATGCGC GAGGTGCTGG CCGCGTACCC CAAGATCGGC
CCGTTGCGGC AGACCGTCGA GTGCTCGGTG ATGGACGCCG CCGACGACAT CGCCTACTCC
CTGCACGATC TGGACGACTT CCACCGGGCC GGGGTGCTCC AGCACGCCTC CGTCGCGGCC
GAGTTCCGCA GCTGGTTGCG CCGCCGGGCC GAGTTCTCCC GGCGCACCCT GCCCGAGGAC
GACCGGCGGC CCGGGGTGGC CCTGGAACGG CTGCGCCGGC GGCTGCAGGA CCGGGACGAG
TGGATCTTCC AGGACGAGGC GTTCGCGGTC GCGGTCGGTC GGGTGGCCAC TGACCTGCTG
GACGGGTTGC TGGCCGTGCC GTTCGATTCC TCGCTGGCCG CGGAGCGGGC CATCGGCACC
TTTACCCGGA GCTGGATCGC GCACCTGCAG GAGTCGGTGG AGATGACCGC CGACCCGCCG
ATCCGCTCCG GACACGTTCA GCTGGGCCGG CAGGCCTGGC ACGAGGTCGC CGTGCTCAAG
TTCGTGCACC AGCGGTTCGT GCTCGAGCGG CCGGATCTGG CCCTGTACCA GCGGGGCCAG
GCGCAGTCGC TGTCCTCGCT GGTTGCCGAC CTGGAGTCGT GGCTGACCGA CCCGATCGAC
TCGGGCCGGG CGCCGCGCCG GCTGGTCGAC CTGGTGGCCC TGGCTACCGC CGGCTACCGG
CGGGTCGCCC GCGAGGAACC GGAGCTGCTG GTCGGCCCGA CCGGGGAACC GATGTCCGGG
CGCGAGGACA TCGTCCGGCT GGGCCGGGGC CGCGGCATCA TCGACTACGT CGCCTCGCTG
ACCGACGACC GGGCCGGCGC CGCCGCCCGC ACGCTGTCGG GTCTGACCGG GCAGCTGTTC
GAAGCCGGGT CCGGGTTGTG A
|
|---|
| Protein sequence | MDPRLARRWA EVPTLSPAAV AADGARGADA ELAAATEGAF RDDLERIRFS PYFSRLAAVT
QVISQGASGQ VVHNRLTHTV KVTSVARAIA VGLRRGPYAQ LADDLGGCDA VVVQAAASAH
DLGHPPFGHL GERILDRIAR SRFGLADGFE GNAQTFRILT ELDVHGESGE GLNLTAAVRA
AVLKYPWSRL HVPDPHPSTL AQPPRGGGPG EEGAGSGKYS AYVLDVGEMR EVLAAYPKIG
PLRQTVECSV MDAADDIAYS LHDLDDFHRA GVLQHASVAA EFRSWLRRRA EFSRRTLPED
DRRPGVALER LRRRLQDRDE WIFQDEAFAV AVGRVATDLL DGLLAVPFDS SLAAERAIGT
FTRSWIAHLQ ESVEMTADPP IRSGHVQLGR QAWHEVAVLK FVHQRFVLER PDLALYQRGQ
AQSLSSLVAD LESWLTDPID SGRAPRRLVD LVALATAGYR RVAREEPELL VGPTGEPMSG
REDIVRLGRG RGIIDYVASL TDDRAGAAAR TLSGLTGQLF EAGSGL
|
|---|
| |