| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2285 |
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| Symbol | |
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| ID | 8447896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2520497 |
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| End bp | 2522116 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645041407 |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003201651 |
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| Protein GI | 258652495 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0517847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00991437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCTAC GTTTCCGGTC CCTGACCACC CGCGCCGCCG TGATCGTCAC GGCCGGCGCC
CTCGCCCTGA CCGGGGCCGT CATCGCCACG GCCGGTCCGG CCGCCGCGGC CGACCCCACC
TGGCAGACCG TGTTCCGGGA CGACTTCACC GGGAGCGGCC TGCCCGACCC GAACAAGTGG
ATCCTGACCC AGGGCACGTC GTACCCGGGT GGTCCGGACG CGTTCGGCAC CGGTGAGATC
GAGACGATGA CCAACCGGCC GGAGAACGTC GACGTCCGCA ACGGAAACCT CTACATCACC
CCGCAACGGG ACAGCGCCGG CCGGTGGACC TCGGCCCGCG TCGAGTCGGC CGCATCGAAC
TACCGGCCAC CGGCCGGGGG CGTCATGCAC GTCGAAAGTC GTTTGCAGTT GCCCAATGTC
ACCGGCAGCG AGGCCCTGGG GTACTGGCCG GCGTTCTGGA TGCTGGGCGG GCCGTACCGG
CAGGACCGCT GGTCGTGGCC GGCCATCGGC GAGTTCGACA TCATGGAGAA CGTCCAGGGG
CTGAACTGGA CCTACAACGT GCTGCACTGC GGCGTGTGGG CCGGCGGCCC GTGCAACGAG
CAGGAGGGCA TCAACAACGG CGTGAACAAC GCCGGGGCGC CGTGCAAGGT CACCACCTGC
CAGGCCGGCA TGCACACCTA CGGGCTGGAA TGGGACGACT CCGGTCCGGT CGAGCAGCTG
CGCTGGTACC TGGACGGCGA GCTGACCTTC ACCGTCAACG CCAACCAGGT GCCCGCCGCC
ACCTGGAACA GTCTGGCCGA CCACGCCGGG TACTTCATCA TCCTCAACGT CGCGATGGGC
GGGGCCTTCC CGAACAAGCT CGGCGGCGGC CCCAACGCCG GCACCAAGCC GGGCGTGCCG
ATGGTCGTCG ACTACGTCGA GGTCAAGTAC GCCGGCGGGT CCGGCACCCC GACCACCAGC
ACTCCGGTCA CCAGCACCCC GACCACGAGC ACGCCGACCA CCAGCACCCC GACCACCAGC
ACCCCGGTGA CCAGCACGCC GACCACCAGC ACGCCGGCGA CCCCGCCGAC CGGTGGTTCC
GCGTCCCCGT CCGCGCTGCG GGTGTCGGGC AGCACGTCCG ACAGCCTGAC CCTGAGCTGG
CAGGGGTCGG CCGGCGCGAG CTACGAAGTC CTGCGGTCGG GTATCCGGAT CGCCACGGTC
ACCGGCACCT CGTACACCGA CCGCGGGCTG TTCCCGAACA CGCCCTACGT GTACTCGATT
CGCGGCGGCG GGGTGACCAC CCCGGAGCTG ACCGCCACCC TTAACGGCGC CTCGGCGAGC
ACCTCGACGG CCGCGCCGAC CAGCGGGCCC ACGACTGAGC CGACTGCTGG GCCGACCACC
GGGCCGGTAT CGGGTGGCCC GTCCGGTCTG AAGGTCACCG GGACCACCGG CAGCACCATC
ACGCTGGGCT GGGCCGGGTC GGCCGGGGCC AGCTACGACG TGCTGCGTTC GGGTATCCGG
ATCGCCACGG TCACCGGCAC TTCGTTCACT GATGTCGGCC TGTTCGCCAA CACCCCGTAC
GTGTACTCGA TCCGCGGCAA CGGGACGACC ACGCCGGAGC TCACGGCCCG GATCGGATAG
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| Protein sequence | MSLRFRSLTT RAAVIVTAGA LALTGAVIAT AGPAAAADPT WQTVFRDDFT GSGLPDPNKW
ILTQGTSYPG GPDAFGTGEI ETMTNRPENV DVRNGNLYIT PQRDSAGRWT SARVESAASN
YRPPAGGVMH VESRLQLPNV TGSEALGYWP AFWMLGGPYR QDRWSWPAIG EFDIMENVQG
LNWTYNVLHC GVWAGGPCNE QEGINNGVNN AGAPCKVTTC QAGMHTYGLE WDDSGPVEQL
RWYLDGELTF TVNANQVPAA TWNSLADHAG YFIILNVAMG GAFPNKLGGG PNAGTKPGVP
MVVDYVEVKY AGGSGTPTTS TPVTSTPTTS TPTTSTPTTS TPVTSTPTTS TPATPPTGGS
ASPSALRVSG STSDSLTLSW QGSAGASYEV LRSGIRIATV TGTSYTDRGL FPNTPYVYSI
RGGGVTTPEL TATLNGASAS TSTAAPTSGP TTEPTAGPTT GPVSGGPSGL KVTGTTGSTI
TLGWAGSAGA SYDVLRSGIR IATVTGTSFT DVGLFANTPY VYSIRGNGTT TPELTARIG
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