Gene Namu_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2253 
Symbol 
ID8447864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2486560 
End bp2487819 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content74% 
IMG OID645041375 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_003201619 
Protein GI258652463 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0483386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.187903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTGA TGAAGAACCA GGTCCGCCCC TACGCCTGGG GCTCGCGTAC CGCGATCCCC 
ACCCTGCTCG GGGCCCCGTC CCCGTCGCCC GAGCCGCAGG CCGAGCTGTG GGTCGGCGCG
CATCCGGCCG ACTCGTCGGT GCTGCTGCGC GACGGTGCGG AGCATCCGCT GCGGCACGCG
ATCACCGACG ACCCGCACGC TCTGCTCGGC TCGCAGGTCG CCCGCGAGTT CGGCGCCACG
CTGCCATTCC TGCTCAAGCT GCTGGCCGCC GACGCGCCGC TGTCGCTGCA GGCGCACCCG
ACCGCCGAGC AGGCCCGGGC CGGCTACGAC GCCGAGGAGT CGGCCGGGGT GCCGATCGAC
GCCCCGTTCC GCAACTACAA GGACCGCTCG CACAAGCCCG AGCTGATGTA CGCCCTGACC
CCGTTCGAGG CGCTGTGCGG TTTCCGGCCC ACCGAGCCGA CCGGGCAACT GCTGGCCGAG
CTGGCGGTGC CCGAACTGGC CGAGCTGCAG GCCACGCTGG CGGCGCAGCC GGGTGAGCCC
GGGCTGCGCG CGGTGGTCAC CGGCCTGCTG ACCGCCGACC GGTCCACGGT CGCGCCGCTG
GTCGAGGCCG TCGCCGCGGC CTGCGCCGCG CGGGCGGGTA CCCCCGGTCC GTTCGCCCGC
GAGTTCGCCA TGGGCGCCCA GCTGGCCGGC CACTACCCGG GCGATCCGGG CGTGCTGATC
GCGCTGCTGA TGAACCGGAT CGACCTGGCC CCGGGCGAGG CCGTGTTCCT GCCCGCGGGC
AACATGCACG CCTACCTGTC CGGGTTCGGC GTGGAGATCA TGGCCAGCTC GGACAACGTG
TTGCGCGGCG GGTTGACGCC CAAGCACGTC GACGTCGCCG AACTGTCCGC CGTGGTCACC
TTCGCGCCGG ACGAGCCGAT GCTGATCCCC GCCGTCCCGG TCGGTCCGGG CGAGCACGCC
TTCCGCACCC CGACGCCGGA GTTCGAGCTG TCCCGGATCG TGGTGCCGCC GACCGGCCGG
GTGCTCGAGC ACGACGGCCC GCAGATCGTG CTGGTCGTGG AGGGCTCGGT CACCCTGACC
GACGCCCAGG GCACGCAACT GGTGGTCGAA CCCGGCCGTT CGGTGTTCCT GCCGGCCCGT
CAGGGCGCGG TCTGGCTGGA GGGCCCCGGC ACCCTGTTCC GGGCCAAGGA CGGGCTCGTC
GGGACCGGGA CGACCGGGAC CGCCGCGGTG ACCGAGCCGG CCGAGTTGTC GCTGGTCTGA
 
Protein sequence
MFLMKNQVRP YAWGSRTAIP TLLGAPSPSP EPQAELWVGA HPADSSVLLR DGAEHPLRHA 
ITDDPHALLG SQVAREFGAT LPFLLKLLAA DAPLSLQAHP TAEQARAGYD AEESAGVPID
APFRNYKDRS HKPELMYALT PFEALCGFRP TEPTGQLLAE LAVPELAELQ ATLAAQPGEP
GLRAVVTGLL TADRSTVAPL VEAVAAACAA RAGTPGPFAR EFAMGAQLAG HYPGDPGVLI
ALLMNRIDLA PGEAVFLPAG NMHAYLSGFG VEIMASSDNV LRGGLTPKHV DVAELSAVVT
FAPDEPMLIP AVPVGPGEHA FRTPTPEFEL SRIVVPPTGR VLEHDGPQIV LVVEGSVTLT
DAQGTQLVVE PGRSVFLPAR QGAVWLEGPG TLFRAKDGLV GTGTTGTAAV TEPAELSLV