| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2221 |
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| Symbol | |
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| ID | 8447832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2449261 |
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| End bp | 2451513 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645041343 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003201587 |
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| Protein GI | 258652431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000781302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.116464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC CGACCACCAC CAGCGCCACC GCCGTCCTGG ACAACGGCTC GTTCGGGACC
CGCACGGTCC GGTTCGAGAC CGGCCGGCTG GCCCAGCAGG CCGCCGGCGC CGTCGCCGCC
TACCTGGACG ACGACACCAT GCTGTTGTCG GCCACCAGCG TCGGCAAGCA TCCGAAAGAG
CAGTTCGACT TCTTCCCGCT CACGATCGAC GTCGAGGAGC GGATGTACGC GGCCGGGCGC
ATCCCCGGAT CCTTCTTCCG CCGCGAGGGC CGTCCGTCCG AGGACGCGAT CCTGACCTGC
CGGCTGATCG ACCGCCCGCT GCGCCCCACC TTCACCAACG GGCTGCGCAA CGAGGTCCAG
GTCGTCATCA CCGTGATGGC GCTGAACCCG GACGACCTGT ACGACGTGCT GGCCATCAAC
GCCGCGTCGG CGTCCACCCA GATCTCCGGT CTGCCGTTCT CCGGCCCCGT CGCCGGCGTC
CGCGTGGCCC TCATCGACGG CCAGTGGGTC GCCTTCCCGC GGCACTCCGA GCTGGAGCGG
GCGGTGTTCG ACATGGTGGT CGCCGGCCGG CTGGCCGGTG ATGATGTCGC GATCATGATG
GTCGAGGCCG AGGCCACCAC CGCCACCGTC GGCCTGGTCG CCGGCGGCGC CGTCGCGCCG
ACCGAGGAGG TCGTCGCCGA GGGTCTGGAG GCGGCCAAGC CGTTCCTGCG GGTGCTGTGC
CAGGCGCAGA ACGAGCTGGC CGGCAAGTCG GCCAAGCCGG TCGCCGAGTT CCCGCTCTTC
CCGGCCTACC AGGAAGACGC CTTCGCGGCC GTCGAGAACG TGGCCTCCGA CGAGCTGGCC
CAGGCGCTGA CCATCGCCGG CAAGCAGGAC CGCGACGCCG CCGTGGACGC GGTCAAGGCC
CGGGTCTACG AGCAGCTCTC GGCGACCTTC GCCGGCCGGG AGTCCGAGCT GGGCAACGCG
TTCCGCTCGG TGACCAAGAA GCTGGTCCGC CAGCGGGTGC TCAAGGACAA GGTCCGCATC
GACGGCCGTG GCCTGACCGA CATCCGCACC CTGGGCGCCG AGGTCGGCTA CCTGCCGCGG
GTGCACGGGA GCGCGCTGTT CGAGCGGGGC GAGACCCAGA TCCTGGGCGT CACCACGCTG
AACATGCTCC GGATGGAGCA GCAGCTGGAC ACGCTGGCGC CGGAGAACCG CAAGCGCTAC
ATGCACAACT ACAACTTCCC GCCCTACTCG ACCGGTGAGA CCGGCCGGGT CGGCTCGCCC
AAGCGGCGCG AGATCGGGCA CGGCGCCCTG GCCGAGCGGG CCCTGGTGCC CGTGCTGCCC
ACCCGCGAGG AGTTCCCCTA CGCCATCCGG CAGGTCTCCG AGGCGCTGGG CTCCAACGGC
TCCACCTCGA TGGGCTCGGT CTGTGCCTCG ACCCTGTCCC TGCTGAACGC GGGCGTGCCG
CTGAAGGCGG CCGTGGCCGG CATCGCCATG GGCCTGGTGT CCGACACCGT CACCGCCGAG
GACGGCACCT CGTCGGTGCA GTACGTCGCG CTGACCGACA TCCTGGGCGC CGAGGACGCG
TTCGGCGACA TGGACTTCAA GGTCGCCGGC ACCCGGCAGT TCGTCACCGC GCTGCAGCTG
GACACCAAGC TGGACGGCAT CCCGTCCGAG GTCCTGCGCG GTGCGCTGGT GCAGGCCCGG
GACGCCCGGT TCACCATCCT GGACGTCATG CACGAGGCGA TCGACGCGCC GGACCCGATG
AGCGAGAACG CCCCGCGGAT CACCACCATC AAGGTGCCGG TCGACAAGAT CGGCGAGGTG
ATCGGGCCGA AGGGCAAGAT GATCAACTCG ATCACCGAGC AGACCGGCGC GGACATCGCG
ATCGAGGACG ACGGCACGAT CTTCGTGTCC GGGCCGGACG GCGGCGCCGT GCAGGCCGCG
ATCGACATCA TCAACTCGAT CGCCAACCCG CAGCTGCCCA AGGTCGGCGA GCGCTTCCTG
GGCACCGTGG TCAAGACCAC TGCCTTCGGC GCCTTCGTCT CGCTGCTCCC GGGTCGCGAC
GGCCTGGTGC ACATCTCCAA GCTGGGCAGC GGCAAGCGGA TCGCCAAGGT CGAGGACGTG
GTCAACGTCG GCGACAAGCT GCAGGTCGAG ATCGTCGAGA TCGACGCCCG CGGCAAGATC
AGCCTGGTCC CGGTCAAGGC CGACGACCCG GCGGACGCGC CGGCTCCGGC CGATTCGGCT
CCGGTGGCCG AGCCCGAGCC CGCGCAGGTC TGA
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| Protein sequence | MSDPTTTSAT AVLDNGSFGT RTVRFETGRL AQQAAGAVAA YLDDDTMLLS ATSVGKHPKE
QFDFFPLTID VEERMYAAGR IPGSFFRREG RPSEDAILTC RLIDRPLRPT FTNGLRNEVQ
VVITVMALNP DDLYDVLAIN AASASTQISG LPFSGPVAGV RVALIDGQWV AFPRHSELER
AVFDMVVAGR LAGDDVAIMM VEAEATTATV GLVAGGAVAP TEEVVAEGLE AAKPFLRVLC
QAQNELAGKS AKPVAEFPLF PAYQEDAFAA VENVASDELA QALTIAGKQD RDAAVDAVKA
RVYEQLSATF AGRESELGNA FRSVTKKLVR QRVLKDKVRI DGRGLTDIRT LGAEVGYLPR
VHGSALFERG ETQILGVTTL NMLRMEQQLD TLAPENRKRY MHNYNFPPYS TGETGRVGSP
KRREIGHGAL AERALVPVLP TREEFPYAIR QVSEALGSNG STSMGSVCAS TLSLLNAGVP
LKAAVAGIAM GLVSDTVTAE DGTSSVQYVA LTDILGAEDA FGDMDFKVAG TRQFVTALQL
DTKLDGIPSE VLRGALVQAR DARFTILDVM HEAIDAPDPM SENAPRITTI KVPVDKIGEV
IGPKGKMINS ITEQTGADIA IEDDGTIFVS GPDGGAVQAA IDIINSIANP QLPKVGERFL
GTVVKTTAFG AFVSLLPGRD GLVHISKLGS GKRIAKVEDV VNVGDKLQVE IVEIDARGKI
SLVPVKADDP ADAPAPADSA PVAEPEPAQV
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