Gene Namu_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2198 
Symbol 
ID8447809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2426649 
End bp2427833 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID645041320 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003201564 
Protein GI258652408 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0462716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000523969 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTCAG TCATCGTCGC CGGGTCCCGA ACCCCGATCG GCCGCTTCAA CGGTGCGCTC 
GCCGCGGTCT CGGCGGCCGA GCTGGGCGGG GTCGCGATCC GCGGCGCCAT CGAGCGGGCC
GGCCTGACCG GGTCCGACGT CGAGTACGTG ATCATGGGCG AGGTGCTGCA GGCGGGCGTC
GGCCAGATTC CGGCCCGGCA GGCGGCGGTC AAGGCCGGCA TCCCGATGGA CGTCCCGGCC
ATCACGGTCA ACAAGGTCTG TCTGTCCGGT CTGGACGCCA TCGCGCTGGC CGACCAGCTG
ATCCGGGCCG GCCAGTTCAA GGTCATCGTG GCCGGCGGCA TGGAGTCGAT GACCCGGGCC
CCGCACCTGC TGATGGGGTC GCGGGCCGGC TTCAAGTACG GCGACGTGAC GATGGTCGAT
CACCTGGCCC ACGACGGGCT GCACGACGTG TTCACCGCCG TGCCGATGGG TGAGCTGACC
GAGACGACCA ACGACCTGGA CTACGTCTCG CGCGCGGAGC AGGACGCCTT CTCCGCCCGG
TCGCACCAGC GGGCCGCCGC GGCCACCGCC GCCGGGGTGT TCAAGGCCGA GATCGAACCC
GTGGTGGTCA AGGGCCGCAA GGGGGACGTC GTCGTCGACA CCGACGAGGG GATCCGCGCC
GAGACCACGG TGGAGACCCT GGCCAAGCTG CGCCCCTCGT TCCGCAAGGA CGGCACCATC
ACCGCCGGTT CGTCCTCGCA GATCTCCGAC GGCGCGGCCG CCGTCATCGT CATGGACAAG
GACGAGGCGC TGCGGCGCGG CCTGGACTGG ATCGCCGAGA TCAAGGCGCA CGGTTCGATC
GCCGGCCCCG ACTCCACCCT GCAGGACAAG CCCGCCCGGG CCATCAAGAA GGCCTGCGAC
AAGGCCGGCA TCACCCCGGA CGAGTTGGAC CTGGTCGAGA TCAACGAGGC CTTCGCCTGC
GTCGGTATCG CGTCGGCCCG GGCGCTGGGC CTGGACGAGG AGATCGTGAA CGTCAACGGC
GGGGCCATCG CGCTTGGCCA CCCGATCGGT GCGTCCGGGG CGCGCCTGGT CCTGCACACC
GCGCTGGAGC TGCAGCGGCG CGGCGGCGGC CTCGGCGTGG CCACCCTGTG CGGCGGTGGC
GGCCAGGGCG ACGCGCTGCT GGTCGAGGTG CCCCGCTCGA GCTGA
 
Protein sequence
MSSVIVAGSR TPIGRFNGAL AAVSAAELGG VAIRGAIERA GLTGSDVEYV IMGEVLQAGV 
GQIPARQAAV KAGIPMDVPA ITVNKVCLSG LDAIALADQL IRAGQFKVIV AGGMESMTRA
PHLLMGSRAG FKYGDVTMVD HLAHDGLHDV FTAVPMGELT ETTNDLDYVS RAEQDAFSAR
SHQRAAAATA AGVFKAEIEP VVVKGRKGDV VVDTDEGIRA ETTVETLAKL RPSFRKDGTI
TAGSSSQISD GAAAVIVMDK DEALRRGLDW IAEIKAHGSI AGPDSTLQDK PARAIKKACD
KAGITPDELD LVEINEAFAC VGIASARALG LDEEIVNVNG GAIALGHPIG ASGARLVLHT
ALELQRRGGG LGVATLCGGG GQGDALLVEV PRSS