Gene Namu_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2115 
Symbol 
ID8447726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2334381 
End bp2335694 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content75% 
IMG OID645041238 
Productcatalytic domain of components of various dehydrogenase complexes 
Protein accessionYP_003201482 
Protein GI258652326 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0616023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0506733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACC TGTTGCGCAT GCCCGAGGTC GCCGCCGGCG GCACCCGCGC CGTGCTGGCC 
ACCTGGTCGG TCGCCGAGAA CGCCGCCTAC ACGGAACGGG ACACCCTGGC CGAGATCGAG
ACCGACAAGG CGACCGTTGA TCTGGACGCC GACGCGGACG GCGTCGTGCT GCGACTGCTG
GTCGCCGCCG GGGCCGAGGT CGGCGTCGGC GACCCGATCG CGCTGCTCGG CGGCCCGGAC
GAGCGGGAGG GGGACGTTGC CGCCCTGCTC GCCGGATTCG GTGTGCCCAC GAACCCGGCC
AGCGGCCCGG GACCGCAGAC GCGGGCCGAG CCGGACGCGG CCGGGTCGGT CGGGGGCTCG
CCAGCGGCCG AGGGCACCTC GCCCGAGGAG GGTCCGGCGC GCCTGTTCGC CAGCCCGCTG
GCCCGAACGC TGGCCCGGGC GGCCGGGCTC GACCTCACGC GTCTGGCACC CGACTCGGGC
CCGGGTGGCC GGATCCGCCG GGTCGACGTC CAGGCGGCCC TGGCCGACCG CGACGGCGCT
TCGGAGTCGC GGGCGCCGTC CGGCCCGGGG GACGGGGCCC CGCCGGGCGG CCGGCCGGTG
TCCGATGGAC GCACCGAGCC GGTGCCGCCC GGTGCCGGCT TCGTCGACCT GCCGCACTCC
CGATCGCGTC GGGCCATCGC CACCCGGTTG ACCGAGAGCG CCCGGACGGT GCCGCACTTC
TACCTGGAGG GCACCGCCCG GGTGGACGCG TTGCTAGCCC TCCGGCGCGA GCTCAACGAG
GACGCTCCGC GACGGATCTC GATCAACGAC CTGATCGTCA AGGCGGCCGC GCGGGCTCAC
CGGCTGGTGC CCGAGCTGAA CGTGATCTGG ACCCCGCAGG CGGTGCGCCG CTTCGACCAT
GTCGACATCG GGGTGGCGGT CGCCGCCGAG CGCGGACTGG TCACCCCGAC CCTGCGGGGG
GTGGACACGC TGTCCATCGG CGCGGTCGCC GAGCAGACCG CCGATCTGAT CCGGCGGGCG
GACGCCGGCC GGCTCCGACC CGAGGAACTG ACCGGCGGGG CCTTGTGCGT GACCAACCTG
GGCATGTTCG GCACCGAGCG GTTCAGCGCG ATCATCAACC CGCCGCAGTC GGCCATCCTG
GCGGTCGGCG CGGCCCGCGA GGAGCCGATC GTGGTCGACG GGCGGCTGGC GGTGGGCACC
GTGCTGAAGG TGACGGTGTC GGTGGATCAT CGGGCGGTCG ACGGCCGGGA GGCGGCCGGC
TGGCTGCGGA CCTTCCTGGC GATCCTGGAA AAGCCGGTGC GCATCCTGAC CTGA
 
Protein sequence
MAHLLRMPEV AAGGTRAVLA TWSVAENAAY TERDTLAEIE TDKATVDLDA DADGVVLRLL 
VAAGAEVGVG DPIALLGGPD EREGDVAALL AGFGVPTNPA SGPGPQTRAE PDAAGSVGGS
PAAEGTSPEE GPARLFASPL ARTLARAAGL DLTRLAPDSG PGGRIRRVDV QAALADRDGA
SESRAPSGPG DGAPPGGRPV SDGRTEPVPP GAGFVDLPHS RSRRAIATRL TESARTVPHF
YLEGTARVDA LLALRRELNE DAPRRISIND LIVKAAARAH RLVPELNVIW TPQAVRRFDH
VDIGVAVAAE RGLVTPTLRG VDTLSIGAVA EQTADLIRRA DAGRLRPEEL TGGALCVTNL
GMFGTERFSA IINPPQSAIL AVGAAREEPI VVDGRLAVGT VLKVTVSVDH RAVDGREAAG
WLRTFLAILE KPVRILT