Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2108 |
Symbol | |
ID | 8447719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2325792 |
End bp | 2326856 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645041231 |
Product | inner-membrane translocator |
Protein accession | YP_003201475 |
Protein GI | 258652319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000443727 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.121569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCCG CCAACCTGGT CTTCGGTGCC CCGCCGGAGA CGACCCGCGG GCAGCGCTGG ACCCGCGCGC TCAAGCGCCG CACCGAGTGG CGCGGAGCCA TCCTGCTCAC GATCGTCGTC GTGGTCGCGT TGCTGTTCGA GCCGCTGGTG TTCAGCGCCT ACGACGTCAC TTTGAGCCGG GTGGCGCTGG TCGGCCTGGT CGCGATCGGG CTGACCGTGG TGATCATCAT GGGCGAACTG GATCTGAGCG TGGCCAGCAC CGTGGTGCTC TCCGGCGTGG TGATGGCCTC GATGCCGAAC CTGGTCCTGG GCGTGCTGGC CGCCCTGGCC ACCGGCCTGG TGGTCGGCGC CGTCAACGCC TTCTTCGTCG TCAAGATCGG CATCAACTCC TTCATCGCCA CCTTGGGCAT GCTGTTCGTG CTCCGCGGCC TGGCCCTGGT CCTGTCCAAC GCCAAACCCG TGCCGCTGGC CGACATCAGC ACGGCGATCG CGTTCGGCAT GCCCTTCCTG GGCCCGCTGA CGCCGCGGAT CCTGCTGTTC GCCGTGGTCT TCGTGCTTTT GTTGATCTTC CTCACCCGGG TCCGCGCCGG CCGCGAGATC TACGCGGTCG GCGGCAACCG GCAGGCGGCG CGCGACGCCG GCATTCCGGT CAACCTCCGC TTGGTCACCG GGTTCATGCT CTGTGGTTTC GTCGCCGCAC TGGCCGGCGT GGTCGACACC ATGGAGCGCA CCGCGGCCGA TCCGACCGCC GGTTCCACCA TCCTGCTCTC GAGCATCGCC GCGGCCATCA TCGGCGGTGT CGCGCTGAAC GGCGGCCGCG GCTCGATCCT GGGCACCCTG ATCGGGGCCC TGTCGCTGGC CATCCTGGAA GTCGGGCTCA CCCTCACCGG GGTCCAGGTC GACATCCAGC AGATCTTCAT CGGCGGCGTG CTCCTGCTCG CGGTCATCAC CGACCCCGCG AGTCTGCGCG CCGCCGGCGC CTCCGTGCGC ACCGTCTTCG CGGGCCGCCG GGCCCGCGGC ACCAAGCCCG ATGTCTCCGT CCCGACCACC GCGTCGTCAT CCTGA
|
Protein sequence | MSSANLVFGA PPETTRGQRW TRALKRRTEW RGAILLTIVV VVALLFEPLV FSAYDVTLSR VALVGLVAIG LTVVIIMGEL DLSVASTVVL SGVVMASMPN LVLGVLAALA TGLVVGAVNA FFVVKIGINS FIATLGMLFV LRGLALVLSN AKPVPLADIS TAIAFGMPFL GPLTPRILLF AVVFVLLLIF LTRVRAGREI YAVGGNRQAA RDAGIPVNLR LVTGFMLCGF VAALAGVVDT MERTAADPTA GSTILLSSIA AAIIGGVALN GGRGSILGTL IGALSLAILE VGLTLTGVQV DIQQIFIGGV LLLAVITDPA SLRAAGASVR TVFAGRRARG TKPDVSVPTT ASSS
|
| |