Gene Namu_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2103 
Symbol 
ID8447714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2321518 
End bp2322168 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content73% 
IMG OID645041226 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_003201470 
Protein GI258652314 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00188792 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0603823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCT TCGACTGCTC CGACCCGATC GAACGGCGGG CCGGCCTGGA GGCCGCCGCG 
CACGCGGCGA CGTCCGGCCA CCTCGTCGTG CTGCCCACCG ACACCGTCTA CGGCATCGGC
GCCGATGCCT TCAACGCGGC CGCCGTCCGG GCCCTGCTGG CCGCCAAGGG CCGCGGTCCC
GACATGCCCG TGCCGGTGCT CGTCGGCTCC TGGACGACCA TCGACGGCCT GGTGATGGCC
GTGCCGCCGG TGGCCCGCAC CCTGGTCGAG GCGTTCTGGC CGGGTGGGTT GTCCCTGGTG
GTGGAGCATG CGCCCTCACT GCAGTGGGAC CTGGGCGATG CCAAGGGCAC GGTGATGCTG
CGGATGCCGC TGCATCCGGT GGCGATCGAC CTGTTGCGGC TGGTCGGGCC GATGGCCGTG
TCCAGCGCCA ACCGCAGCGG CAACCCACCG GCCACCACCG CCGCCGATGC GCAGGCTCAG
CTGGGCGAGC AGGTGTCGGT CTATCTGGAC GGCGGGCCGT CGCCGATCGG CGTGGCCTCC
ACCGTCGTCG ACGTGACCGG GGAGATCCCG CGGGTGTTGC GAGTGGGGGC GGTCCCGTTG
GATCGGCTGC GGGACGTGGT CGGCGCGGTC GAGGACGCCA CCGCCCGCTG A
 
Protein sequence
MTTFDCSDPI ERRAGLEAAA HAATSGHLVV LPTDTVYGIG ADAFNAAAVR ALLAAKGRGP 
DMPVPVLVGS WTTIDGLVMA VPPVARTLVE AFWPGGLSLV VEHAPSLQWD LGDAKGTVML
RMPLHPVAID LLRLVGPMAV SSANRSGNPP ATTAADAQAQ LGEQVSVYLD GGPSPIGVAS
TVVDVTGEIP RVLRVGAVPL DRLRDVVGAV EDATAR