Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2097 |
Symbol | |
ID | 8447708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2315061 |
End bp | 2315963 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645041220 |
Product | homoserine kinase |
Protein accession | YP_003201464 |
Protein GI | 258652308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000128102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0746509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG GCGACGGGCC GTCGTTCGCC CTGCAGGTCC CGGCCACCTC GGCCAACCTC GGACCGGGGT TCGACAGTTT CGGGCTGGCG CTGGCCCGCT ACGACGAGGT CACCGTGTGC CGTACGGACG GTCCGCTCGA GGTCTGGGTG TCCGGCCACG GCGCCGGGCA GGTCCCGCTG GACGGGCGGC ACCTGGTCGT CCGGGCGATG ACCGAGGCCT GCCACGCCGC CGGGATCGAG CTGCCCGGGG TCCGGCTGAC CTGCCTGAAT CGGATCCCGC ACGGCGGGGG ACTGGGCTCC TCGGCCTCGG CCATCGTCGC CGGGCTGCTG CTGGGCCGGG AGCTGGCCGC CGCGGCCGGC GCCCCGCGGT TGACCGACGA GACGGTGCTG GCCCTGGGCA CGGCGATGGA GGGCCATCCC GACAACGTTG CCCCCGCGCT GTTCGGCGGT TTCACCCTGG CCTTCACCGA CGACACCGGG CAGCCGGTCG CGATCCGCCG GGAGGTGCAC CCCGACATCC GGGTGGTCGT CTTCGCGGCC GAGGAGGCCA GCTCCACGCA CCACACCCGC GGGCTGCTGC CGGCAACCGT GCCGCACGCC GACGCCAGCG CCAACGCCGC CGCCGCCGCG GTGCTCGTGC ACGCTCTGAC CTGCGATCCG GCCTTCCTGT ACGCCGGTAC CCGGGACCGA TTGCACCAGC ACTATCGCGC CGCGTCGATG CCGGCGACGG CGCAGCTGAT GGCCGAGCTG CGCGAGGCCG GGTACGCCGC GGTGGTCTCC GGGGCCGGGC CGTCCGTGAT CGCCCTGGTC ACCGGCGAGT TCGACGTCTC TCGTTGGCGG CGAGCGGGTT TCGACGTCGA CTTCGTGCCG GTCTGCACCA CCGGCGCCCA CCTGCTGCCG TAG
|
Protein sequence | MTHGDGPSFA LQVPATSANL GPGFDSFGLA LARYDEVTVC RTDGPLEVWV SGHGAGQVPL DGRHLVVRAM TEACHAAGIE LPGVRLTCLN RIPHGGGLGS SASAIVAGLL LGRELAAAAG APRLTDETVL ALGTAMEGHP DNVAPALFGG FTLAFTDDTG QPVAIRREVH PDIRVVVFAA EEASSTHHTR GLLPATVPHA DASANAAAAA VLVHALTCDP AFLYAGTRDR LHQHYRAASM PATAQLMAEL REAGYAAVVS GAGPSVIALV TGEFDVSRWR RAGFDVDFVP VCTTGAHLLP
|
| |