| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2068 |
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| Symbol | |
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| ID | 8447678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2279877 |
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| End bp | 2282063 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645041192 |
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| Product | hypothetical protein |
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| Protein accession | YP_003201437 |
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| Protein GI | 258652281 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000291289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0152831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGGC AGGTGACTTG GCGCGAGCTC AGATTCCCCG GCCCAATCCC ACCCGACGCC
GTGCGCGCCT GTCTGGTCGG CTGCGGCGGC CTGCCCGGTA ACCCGCTGCT CATCCTCGAA
GCGGTCGCCA CCGGCGGCCG GCTGCGCTGG CGCATCGGTG CCCCGTCAAG CCTGAGCGTC
CGGCAAGCCT GCCAACAGGT GACCCTGCAT CTGCCGGGCA CCATCGTCAG CCCGGTCGAG
GGCACGTGGC CACCGGTCGA GACCGCCCAA ATCGGGGCGC AGGTACGGAT CAGCAGGACC
AGGCTGCTGC CGCTGGGTGA CCTGGATCCG GATGCGGTGA CTCGCGGGCT GCTCGGGGCG
CTGGCTTTGG CCGGCCAAGG TGAATCCCTG CACTACCAGC TGCTACTCGG TGCCCGTATC
CGCCCAACTC GGCCACCCGA AGCAGCCAAA CCGCTGCCTC GCGGTGCCAC CGAGCGGCTC
GAGCAACCGG GCTTCGGCTG CCTGGTGCGC CTGGCCGCCA CCGCCGCGCA CGATGGACGC
GCCCGCATCT TGGTGCGACA GGTTGCCGCG AGCTTGAAAG GCCTGGAAGC CCCTGGGGTA
GCGGTCACCG TCCGCCGGTG CGCAGTGACG GCACTGGCTC GGGTATCGCT GCCGCTCTGG
TGGCCATTGT GGATCTCCGC CAGCGATCTG GTGCCACTGA CGGCCTGGCC GGTGGCTGAC
GACCCGAAGG CCGAGCTGGC CGGCTTGCCG CCGCGGCACC CGAAGCTGCT GCCGCCCACG
GCCGCCCACC CCACGGAGGG GCTCGACATC GGCAGGGCCG TTGCCGTCAG TATGGAGCGG
CGTATCGCGC AACCGGTCGG CGACACTCTG CAGCACCGGC ACGTACTGGG GCCGTCCGGG
GTGGGCAACT CGACGTGGGT CGGCTATGCG GCCCTGCAAG ACATCCTGGC CGGCCGGTGT
GTCGTGGTCA TCGACCCGAA GCGCGATCTG GTCACCGAAC TGCTGGCCCG TATCCCGGCC
GACCGGTTGG ACGACGTCGT GGTGCTCGAC CCGGCCAGCC GCACCCCGCT GGGGGTCAAC
CCCTTGGCCG GTGCCGACCC TGACCTGGCA GCGGACTCGA TCGTCGCCGT CTTCCACTCC
CTGTACGGCG ACGGGCTCGG ACCCCGCTCG ACCGACATCC TCCATGCCGC CGTGTTGACA
CTGGCCCGGC GGGGTGATGC CTCGCTGGCG ATGGTGCCGC TGCTACTGAC CAACCCCGGT
TTCCGCCGTT CGCTGGTCGG CCGTGCCCAT AAGGAAGACC CGCTCGGTGT CGGCAGCTTC
TGGGCCTGGT TCGACAGCCT GAGCAGTGGC GAACAGGACA TGGTCACCCG GCCCCTGCTC
AACAAACTGC GGCCGATCAT GCTGCGGCCA TCCCTGCGCG GCGTGTTCGG ACAACGGCGT
CCGGCGATCT CCGTCGAGCA GATCCTGGCC GAGCGAAAAA TCCTGCTGGT CGAACTGCGC
AAGGACCAGA TCGGTCCCGA GGCCGCCGGG CTTATCGGGT CACACGTGGT CGCCCACCTG
TGGCGGGCCA TCCTCGGTCG GCTGAGTCTG CCGGCCGAGC AGCGCCACCC GTTCATGGTC
TACATCGACG AAGTCCAGGA CTACCTGCGG CTGCCGGGCA GCCTGGCCGA CGCGCTGGCC
CAGGCCCGCG GCCTCGGGGT ATCCGTCACG GCAGCCCACC AGCACCTGGG ACAGCTCGGC
CGACTCGACG CCGATCTGGA AGCCAACACC GCCACCAAGC TGTTCTTCCG GCTCAGTCCG
GGCGACGGCA GACACCTGGC CAGCGCCGTC GGTGCCGGGC AGCTGACCGC CGACGACTTC
ACCCTCCAAC CCGACCACCA GCTCTACGCC CGGCTGCTGG TCAACGGCCG ACTGCTGCCC
TGGGTCTCCG TCGCCACCCA GCCTCTGCCG CCACCACTGC ATGACCCGGC CCAGGTCCAA
GCCCGCAGCG AAGCCCACTA CGGCCGCGCC CTTGACGACG TCGAAGCCGA CCTGCTCAGC
CTGGCCGACG CCACGGCCCG AGAGGGCAGC ACCGAGCACC CGGACGAAGC CACACCACGC
ACCGGCTTCG GCCGCCGCCG GCCCAGCGCA CCATCCCGGC CGTCCGCCGA ACCCCACCCC
GTTACCCAGA AAAGAGGTCG GATATGA
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| Protein sequence | MSRQVTWREL RFPGPIPPDA VRACLVGCGG LPGNPLLILE AVATGGRLRW RIGAPSSLSV
RQACQQVTLH LPGTIVSPVE GTWPPVETAQ IGAQVRISRT RLLPLGDLDP DAVTRGLLGA
LALAGQGESL HYQLLLGARI RPTRPPEAAK PLPRGATERL EQPGFGCLVR LAATAAHDGR
ARILVRQVAA SLKGLEAPGV AVTVRRCAVT ALARVSLPLW WPLWISASDL VPLTAWPVAD
DPKAELAGLP PRHPKLLPPT AAHPTEGLDI GRAVAVSMER RIAQPVGDTL QHRHVLGPSG
VGNSTWVGYA ALQDILAGRC VVVIDPKRDL VTELLARIPA DRLDDVVVLD PASRTPLGVN
PLAGADPDLA ADSIVAVFHS LYGDGLGPRS TDILHAAVLT LARRGDASLA MVPLLLTNPG
FRRSLVGRAH KEDPLGVGSF WAWFDSLSSG EQDMVTRPLL NKLRPIMLRP SLRGVFGQRR
PAISVEQILA ERKILLVELR KDQIGPEAAG LIGSHVVAHL WRAILGRLSL PAEQRHPFMV
YIDEVQDYLR LPGSLADALA QARGLGVSVT AAHQHLGQLG RLDADLEANT ATKLFFRLSP
GDGRHLASAV GAGQLTADDF TLQPDHQLYA RLLVNGRLLP WVSVATQPLP PPLHDPAQVQ
ARSEAHYGRA LDDVEADLLS LADATAREGS TEHPDEATPR TGFGRRRPSA PSRPSAEPHP
VTQKRGRI
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