Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2044 |
Symbol | |
ID | 8447653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2255105 |
End bp | 2256484 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645041169 |
Product | transposase mutator type |
Protein accession | YP_003201415 |
Protein GI | 258652259 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0327519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00538259 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCATGA CCGAGCATTC CTCGTCGTTG CCGGCGGATG ATGCGGTGCC GGGGCCGGGG CGGGTGAGTG GCCGGCAGCT GCGGGAGTTG CTGGCCGACG ACGTGTGGCT CGACGAGTTG ATCGACCGCG CCGAGGCCGG CGGTGTCCGG CTGACCGGCG AGGGCGGGTT CCTGCCGGAG ATGATCAAGG CGGTGCTCGA GCGGGGCCTG GCTGCGGAAC TGACCTCGCA TCTGGGATAC GAGGTGGGCG ACCCGGCTGG TCGGGGCTCG CCGAACAGCC GGAACGGGCA CACCCCGAAA ACGGTGGCGA CCGAGGTCGG GCCGGTCCCG TTGAGCGTGC CGCGGGACCG GACGTCGACG TTCGAGCCGC GTCTGGTGCC CAAGGGTCAA CGCCGCCTGG GCGGGTTGGA CGAGCAGATC ATCAGCTTGT ACGCGGGCGG CATGACCGTC CGCGATATCC AGGCTCATCT GGCCCGCACG TTGGGCACCG AGCTGTCCCA CGACACGATC AGCAAGATCA CCGACGCGGT GCTGGACGAG GTCAAGGCCT GGCAGTCCCG GCCGTTGGAA GAGCTCTACC CGATCATGTA CCTGGACGCG ATCGTGGTGA AGGTCCGCGA CGGGCACCAG GTTCGGAACA AGAGCGCGTA CATCGCCGTC GGCGTCGATA TGGCCGGGAT CAAGCACGTG CTGGGGATCT GGGTGCAGTC CACCGAGGGC GCCAAGTTCT GGGCCGGGGT CTGCGCCGAG CTGGCCAACC GGGGCGTCAA GGACGTGCTG ATCGTGTGTT GCGACGGGCT GACCGGGCTA CCCGAGGCGA TCGAGGCGAC CTGGCCGCGG ACGACCGTCC AAACGTGTGT GGTCCACCTG ATCCGGGCCT CGATGCGGTT CGTGTCCTAC ACCGACCGGC GGGCTGTCGT GGCCCAGCTC AAGACGATCT ACACCGCCCC GACCGTGGAC GCCGCCGAGA CGGCGCTGTT GACGTTCGCC GAGACCGATC TGGCCCGCCG CTACCCGGCC TGCCTGCGGA CCTGGCAGGA CGCCTGGGAC CGGTTCATCC CGTTCCTGGC GTTCCCATGG CCGGTCCGCA AGATCATCTA CACCACGAAC GCGATCGAGT CGTTGAACTA CCAGCTCCGC AAGATCATCA AGAACCGCGG GCACTTCCCC AACGACGACG CAGTGGTCAA GCTGCTGTGG CTGGCCATCC GCGATATCGA GGACAAACGC GCCCGGGACC GGACCTCGGA GAAGGGCAAA CGAGTCGGAC GCACCGCCGA GGGCCGGCTC GTCGAGGGCC AGGTCACCAC CGGTTGGAAA CCCGCGCTCG GTGCACTGGC CATCCAATAC CCCGACCGCA TCACCCCCAG GATCAGCTGA
|
Protein sequence | MTMTEHSSSL PADDAVPGPG RVSGRQLREL LADDVWLDEL IDRAEAGGVR LTGEGGFLPE MIKAVLERGL AAELTSHLGY EVGDPAGRGS PNSRNGHTPK TVATEVGPVP LSVPRDRTST FEPRLVPKGQ RRLGGLDEQI ISLYAGGMTV RDIQAHLART LGTELSHDTI SKITDAVLDE VKAWQSRPLE ELYPIMYLDA IVVKVRDGHQ VRNKSAYIAV GVDMAGIKHV LGIWVQSTEG AKFWAGVCAE LANRGVKDVL IVCCDGLTGL PEAIEATWPR TTVQTCVVHL IRASMRFVSY TDRRAVVAQL KTIYTAPTVD AAETALLTFA ETDLARRYPA CLRTWQDAWD RFIPFLAFPW PVRKIIYTTN AIESLNYQLR KIIKNRGHFP NDDAVVKLLW LAIRDIEDKR ARDRTSEKGK RVGRTAEGRL VEGQVTTGWK PALGALAIQY PDRITPRIS
|
| |