Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2025 |
Symbol | |
ID | 8447634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2235810 |
End bp | 2236508 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645041151 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003201397 |
Protein GI | 258652241 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00234923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0065159 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGCCG ATCCGACCCC TGGCGACGAC CTGTTCGCGC CGAGCCTGGT GGAGGCGACC ACCCGCCGGT TGCGCAACGA GATTCTCTCC GGCGCGTTGG CTCCCGGCGA GCGGATCATC GAAGAGCAGA TCTGCCAACG CTTCTCGATC AGCCGGGCGC CGGTACGCGA ATCCCTGCGG CTGCTGGTCC AGCAGGGACT GGTCGAACAC CTGCCGCGGC GGGGGGCCCG GGTGGCCACC TGGTCGGAGG AGGACATCCG GCAGCTGTTC GAGATCCGCG CGGTGCTCGA GCGGCACGCC ATCATCACGG CCATGCCGCT GGTCTTCGAC GGTGGGGACG ACCCGCTGGC GCCGGTGCGA GCGCGGCTGG AGCAGATGCG GGCGGCCGAG GAATCGGACG ACGAGCTCGA ACGCGACGAC GCGCACCGCG CCTTCCACGC GGCCATCGTC GCGCTGGCCG GCAACCGGCA GCTGGATCTG ACCCTGGAAC CCATTTTGAT CAAGTTGCAG CGCCCGATGG CGATCAACCT GCGGCTGGAG GCCAACCTGG TCGGCCCGGG GGAGGGCATC CGGCGGCACG CGGCCCTGGT CACCGCGCTG GAGAGCAACG ACACCGACGT GGTGCTGGCC GCCCTGGCCG AGCACGGCGG TCAGCGGTAT CTGAAGTACC GGCGGGACGC TGCCGCCGTC GCCGGCTGA
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Protein sequence | MSADPTPGDD LFAPSLVEAT TRRLRNEILS GALAPGERII EEQICQRFSI SRAPVRESLR LLVQQGLVEH LPRRGARVAT WSEEDIRQLF EIRAVLERHA IITAMPLVFD GGDDPLAPVR ARLEQMRAAE ESDDELERDD AHRAFHAAIV ALAGNRQLDL TLEPILIKLQ RPMAINLRLE ANLVGPGEGI RRHAALVTAL ESNDTDVVLA ALAEHGGQRY LKYRRDAAAV AG
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