Gene Namu_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2025 
Symbol 
ID8447634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2235810 
End bp2236508 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID645041151 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003201397 
Protein GI258652241 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00234923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0065159 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCCG ATCCGACCCC TGGCGACGAC CTGTTCGCGC CGAGCCTGGT GGAGGCGACC 
ACCCGCCGGT TGCGCAACGA GATTCTCTCC GGCGCGTTGG CTCCCGGCGA GCGGATCATC
GAAGAGCAGA TCTGCCAACG CTTCTCGATC AGCCGGGCGC CGGTACGCGA ATCCCTGCGG
CTGCTGGTCC AGCAGGGACT GGTCGAACAC CTGCCGCGGC GGGGGGCCCG GGTGGCCACC
TGGTCGGAGG AGGACATCCG GCAGCTGTTC GAGATCCGCG CGGTGCTCGA GCGGCACGCC
ATCATCACGG CCATGCCGCT GGTCTTCGAC GGTGGGGACG ACCCGCTGGC GCCGGTGCGA
GCGCGGCTGG AGCAGATGCG GGCGGCCGAG GAATCGGACG ACGAGCTCGA ACGCGACGAC
GCGCACCGCG CCTTCCACGC GGCCATCGTC GCGCTGGCCG GCAACCGGCA GCTGGATCTG
ACCCTGGAAC CCATTTTGAT CAAGTTGCAG CGCCCGATGG CGATCAACCT GCGGCTGGAG
GCCAACCTGG TCGGCCCGGG GGAGGGCATC CGGCGGCACG CGGCCCTGGT CACCGCGCTG
GAGAGCAACG ACACCGACGT GGTGCTGGCC GCCCTGGCCG AGCACGGCGG TCAGCGGTAT
CTGAAGTACC GGCGGGACGC TGCCGCCGTC GCCGGCTGA
 
Protein sequence
MSADPTPGDD LFAPSLVEAT TRRLRNEILS GALAPGERII EEQICQRFSI SRAPVRESLR 
LLVQQGLVEH LPRRGARVAT WSEEDIRQLF EIRAVLERHA IITAMPLVFD GGDDPLAPVR
ARLEQMRAAE ESDDELERDD AHRAFHAAIV ALAGNRQLDL TLEPILIKLQ RPMAINLRLE
ANLVGPGEGI RRHAALVTAL ESNDTDVVLA ALAEHGGQRY LKYRRDAAAV AG