| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2021 |
|---|
| Symbol | |
|---|
| ID | 8447630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2231539 |
|---|
| End bp | 2233059 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645041147 |
|---|
| Product | Carboxylesterase type B |
|---|
| Protein accession | YP_003201393 |
|---|
| Protein GI | 258652237 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2272] Carboxylesterase type B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000953164 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00956228 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACCG TGACCGCCGG AACCGACGCC GAGCCCGGGT CCGGGCCCCA GGTCCGCACC
GGCGCCGGGG TGCTCCGGGG CCGGTGGGAC GCCGGCGTGG CTGTCTTCCT GGGCGTCCGG
TACGCCGAGC CACCGGTGGG CACGCTCCGC TTCGCCGCCC CGCATCCGGC CCGTCCGTGG
GCGGGCGTGC GGCCGGCGGT GGCGTTCGGC CCGCCGCCAC CGCAACCCGG TACCGCCGCG
CCGGGAACGG ACTGGCTCAC CCTGAACATC TTCTCGCCCG ACCCGGCGCC GGCCGCCGGC
CTGCCGGTGC TGGTCTGGAT TCCCGGCGGC GGGTACCTGA TCGGCTCGGG CAGCCAACCG
GAGTTCGACG GCGCCGTCCT GGCTACCGGC GGGATGGTCG TGGTGACGGT GAACTACCGG
CTGGGCCTGG AGGGTTTCGG GCTCCTGGAC GGCGCCCCCG CCAACCGGGG TCTGCTGGAC
CAGGTGGCGG CGTTGCAGTG GGTGCACGAG CACATCCGGG CGTTCGGCGG CGACCCGGGC
CGGGTGTGCG TCGTCGGCGA ATCGGCCGGC GGCGGGTCGG TGGCCGCCCT GCTGGCCATG
CCGCGGGCGG CCGGGCTGTT CCGCCGGGCG ATCGCCCAGA GCGTGCCCGG CCCGTTCTTC
TCGGTCGAGC TGGCCGCCGA CATCGCCACC GCCTGGGCCG CCGAACTGGG GGTCCGGCCC
ACGGTCACCG AGCTGGCCGC GATCGACCCC GGCCGCCTGC CGGCCGCCGG CGAGGCCGTC
TCCTCCGCCA TCGGGCGGTG GGCCGACCGA TGGGGACCGA TCTGTTTCCG GCCCATCCCG
ATCGCGCCGG TCGTCGACGG CGACGTCCTG CCGGCCGCCC CGTGGGCGGC CGTGGCCGGT
GGGGCCGGTC GCGACGTGGA CCTGCTCACC GGTCACACCC GCGACGAGCA TCGGCTGTTC
AGCCTGCTCG ACGGGGTTCT GGGCAGCGTG ACCCCGGAGG GGGCCGACGC CGCCCTGCGC
GCGCTGGCGC CGGGCCCGGA CGGTGCCCGC CGCTACCGCG AGGCCTACCC CGGCGCCGGC
CCGGAGCAGC TGTACGAGCT CGTCAACGGC GACTGGCTGT TCCGCATGCC CTCGCTGCAG
CTGGCCCAGG CGCACGCGGC CGCCGGCGGG CGCACCTACC TATACGAGCT GACCTGGCCG
GCTCCGGGCC TGGGCGGAGC GCTGGGCGCC TGCCACGGAT TGGACGTGCC GTTGGTCTTC
GGCACGCTGG ACCGCGGTCA ACCGGCCATG CTCATCGGCG ACCCTCCCCC GGCCGCCGCG
CGCGACCTGT CCGGCTGGAT CCGCCGGGCC TGGACGGCGT TCGCCGCCGA CGGTGACCCG
GGGTGGCCGG CCTTCGACAC CGAACGGTGG CTCACCCAGC TGCTGGACAC CGACCCCACC
GTCACCGGGT ATCCCGAGCG GGTCTCCGCC GAGTTGTGGC GCGAGCACTC CTTCGCGGCC
CTGCCGCTGC TCGGGCGCTG A
|
|---|
| Protein sequence | MVTVTAGTDA EPGSGPQVRT GAGVLRGRWD AGVAVFLGVR YAEPPVGTLR FAAPHPARPW
AGVRPAVAFG PPPPQPGTAA PGTDWLTLNI FSPDPAPAAG LPVLVWIPGG GYLIGSGSQP
EFDGAVLATG GMVVVTVNYR LGLEGFGLLD GAPANRGLLD QVAALQWVHE HIRAFGGDPG
RVCVVGESAG GGSVAALLAM PRAAGLFRRA IAQSVPGPFF SVELAADIAT AWAAELGVRP
TVTELAAIDP GRLPAAGEAV SSAIGRWADR WGPICFRPIP IAPVVDGDVL PAAPWAAVAG
GAGRDVDLLT GHTRDEHRLF SLLDGVLGSV TPEGADAALR ALAPGPDGAR RYREAYPGAG
PEQLYELVNG DWLFRMPSLQ LAQAHAAAGG RTYLYELTWP APGLGGALGA CHGLDVPLVF
GTLDRGQPAM LIGDPPPAAA RDLSGWIRRA WTAFAADGDP GWPAFDTERW LTQLLDTDPT
VTGYPERVSA ELWREHSFAA LPLLGR
|
|---|
| |