Gene Namu_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2020 
Symbol 
ID8447629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2230776 
End bp2231522 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID645041146 
ProductCoenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein 
Protein accessionYP_003201392 
Protein GI258652236 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000114959 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00731044 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGCCC ACCTGTCGGT CGCCGAGCCC CGGCCGGTCG TCGACTGGGC CCGGCGGCTG 
GCGGACGCGG GTTTCCAGAG CCTGTGGATC CCGCAGCTGA TCGGCCGCGG CATGTTCGTG
CCCGATCCGT TCGTCACCCT GGCCGCCGCG GCCGTGGCCA CCCGGACGAT TCCCGGGGTA
GAGCTGGGGA CGGCCACCGT GCAGGTGCCG TTGCACCACC CGGTCGACCT GGCCCACCGG
ATCCGCTCGG TGCAGCTGAT CTGCGGGGAC CGCCTCAGCA TCGGCCTGAG TCCCGGATCG
ACGGCCACCG ACTTCGCCGC GCTCGACCAG GATTTCCCCT CCCGCTTTCG TACCTTCGGG
CAGCGGGTGG GCCGGCTGCG CGGATTGCTC ACCGAAGGCC ATGACGACGG CGCGGATCTG
GGCGTCACCG ACCCGGTCCG CGGCTGCCCG CCGTTGCTGC TGGGGTCCTG GGGCGCCAAC
GTCGAGCGGG CCGCCCGCGA GTTCGACGGC TGGCTGGCCT CGGGCTACCG GCGAACGCCG
GAACAGATTG TCGCCGCCCA TCAGCGGTTC CGGGCCGCCG GCGGCCGGCG GGCCATCGTC
ACCGCGGTGC CGGTCGCCGG ACCGGGCGAC CTGCCGCGGG TGGGACAGGA GCTGCACCGC
TACGCCGACG CCGGGTTCGA CGACGCGGTG GTGCTGATCG AACCGGCCGG GCCCACCCCG
GAGCTGGTCA GAGCGCTGTT CCCGTAA
 
Protein sequence
MLAHLSVAEP RPVVDWARRL ADAGFQSLWI PQLIGRGMFV PDPFVTLAAA AVATRTIPGV 
ELGTATVQVP LHHPVDLAHR IRSVQLICGD RLSIGLSPGS TATDFAALDQ DFPSRFRTFG
QRVGRLRGLL TEGHDDGADL GVTDPVRGCP PLLLGSWGAN VERAAREFDG WLASGYRRTP
EQIVAAHQRF RAAGGRRAIV TAVPVAGPGD LPRVGQELHR YADAGFDDAV VLIEPAGPTP
ELVRALFP