Gene Namu_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2009 
Symbol 
ID8447618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2217342 
End bp2218022 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content78% 
IMG OID645041137 
Producthypothetical protein 
Protein accessionYP_003201383 
Protein GI258652227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00291415 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000144939 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCGCGA CTGACATCTC CGGCCCCTCA GCGGGTCCGC CGTTCCCGGT GCCCCCGGCG 
CTCGCCGCCG GACCGGGGTG GTGGTGGCCC TGGGTGCGGT GGGCCACCCT GGGTGAGTTC
CTCGGTTTCG CGGTCCCGGC GCTCACCGCT GCCGTCGTCT CGTCCTGGCC GGCCTGGGCC
GCGGCCCCGC TGCTCGTGCT GGCCGGGGCG GCGGAGGGCG CGGCACTGGG CCTGGCCCAG
GCTCACGTGC TGCACCGGGC GCTGCCGGCC CTGGTGGCCG GGCGCTGGGT ACTGGCCACG
GCCGCCGGCG CGGTGCTCGC CTGGAGCATC GGATTGCTGC CGATGCTGGC CGACGGTGCC
CTGTTCGCGC TGCCGGTCCC GATCCTGGTC GTCGGCGGCC TGCTGCTGGG GGCGGCGCTG
CTCGGCTCGA TCGGCACCGC CCAGTGGCTC GTGCTGCGGC AGCTGGTCCC CGGATCGGCC
CGGTGGATCG GCGCGACGGC CGGCGCCTGG GCGGTGGGCC TGCTGGTCTT CACCGCGATC
ACCACCCCGC TGTGGGCGCC CGGTCAGCCG GCCGCGCTGA TCGCGGCGAT CGGAGTGCTC
GGCGGTCTGG CCATGGCCGG CACCGTCGCC GCCCTCACCG GGTGGGCCCT GGTCCGCCTG
CTCCGCCCGC CGGCGCGGTG A
 
Protein sequence
MGATDISGPS AGPPFPVPPA LAAGPGWWWP WVRWATLGEF LGFAVPALTA AVVSSWPAWA 
AAPLLVLAGA AEGAALGLAQ AHVLHRALPA LVAGRWVLAT AAGAVLAWSI GLLPMLADGA
LFALPVPILV VGGLLLGAAL LGSIGTAQWL VLRQLVPGSA RWIGATAGAW AVGLLVFTAI
TTPLWAPGQP AALIAAIGVL GGLAMAGTVA ALTGWALVRL LRPPAR