Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2009 |
Symbol | |
ID | 8447618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2217342 |
End bp | 2218022 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 645041137 |
Product | hypothetical protein |
Protein accession | YP_003201383 |
Protein GI | 258652227 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00291415 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000144939 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCGCGA CTGACATCTC CGGCCCCTCA GCGGGTCCGC CGTTCCCGGT GCCCCCGGCG CTCGCCGCCG GACCGGGGTG GTGGTGGCCC TGGGTGCGGT GGGCCACCCT GGGTGAGTTC CTCGGTTTCG CGGTCCCGGC GCTCACCGCT GCCGTCGTCT CGTCCTGGCC GGCCTGGGCC GCGGCCCCGC TGCTCGTGCT GGCCGGGGCG GCGGAGGGCG CGGCACTGGG CCTGGCCCAG GCTCACGTGC TGCACCGGGC GCTGCCGGCC CTGGTGGCCG GGCGCTGGGT ACTGGCCACG GCCGCCGGCG CGGTGCTCGC CTGGAGCATC GGATTGCTGC CGATGCTGGC CGACGGTGCC CTGTTCGCGC TGCCGGTCCC GATCCTGGTC GTCGGCGGCC TGCTGCTGGG GGCGGCGCTG CTCGGCTCGA TCGGCACCGC CCAGTGGCTC GTGCTGCGGC AGCTGGTCCC CGGATCGGCC CGGTGGATCG GCGCGACGGC CGGCGCCTGG GCGGTGGGCC TGCTGGTCTT CACCGCGATC ACCACCCCGC TGTGGGCGCC CGGTCAGCCG GCCGCGCTGA TCGCGGCGAT CGGAGTGCTC GGCGGTCTGG CCATGGCCGG CACCGTCGCC GCCCTCACCG GGTGGGCCCT GGTCCGCCTG CTCCGCCCGC CGGCGCGGTG A
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Protein sequence | MGATDISGPS AGPPFPVPPA LAAGPGWWWP WVRWATLGEF LGFAVPALTA AVVSSWPAWA AAPLLVLAGA AEGAALGLAQ AHVLHRALPA LVAGRWVLAT AAGAVLAWSI GLLPMLADGA LFALPVPILV VGGLLLGAAL LGSIGTAQWL VLRQLVPGSA RWIGATAGAW AVGLLVFTAI TTPLWAPGQP AALIAAIGVL GGLAMAGTVA ALTGWALVRL LRPPAR
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