Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2001 |
Symbol | |
ID | 8447610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2208939 |
End bp | 2210195 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645041129 |
Product | ABC transporter related |
Protein accession | YP_003201375 |
Protein GI | 258652219 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.985139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00587688 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGGCC GAGTCCTCGG GGCCGAGCTG GGCGAGGTGA ACCTGCCGTC CGGGCCGGCC CTGCTGGTGC TCGGGCCGGT GCTGCTGGCG GTGCTCGGGC TGGTGATCTA CAGCCTGGTC GACCTGGTGC GGGCGCCGCA GGTCAAGTAC CTGCCCAAGC TGGCCTGGGG GTTGATCATC GTCATCGGAT CGGCCCCGTT GGGCGCGATC GCCTACCTGC TGTTCGGCCG CGGTCACGCC GCGACGCCCG AGCGGCCCGG CCCTCCGGCC CCGGTCCCGG CCCCCGTCCC CGGTCCCACC TCAGCCCTTG CCCGCGTCGC GGTCGAGCCC GCCCTCCGCG ACCCGATCCT GATCGAAACC GCCGCGCTGA CCAAGGATTA CGGCGGCACC GGGCTGTTCG ACGTCGGGCT GGCCATTCCC CGTGGCTGCG TCTACGGGCT GGTCGGCCCG AACGGCTCGG GCAAGACCAC CCTGTTGTCC ATCCTGGCCG GGACGCGGCA CGCCGATCGC GGTACGGTCC GGATCGCCCT GCCGCGAACG GCGATCGCGG TCTGCCCGGA CGTCCCCGAA TTCGACGGCT GGCTGACGGC CACGGAGGCG GTGAACCTGG CCCGGACGAT GATCGGGATG CCCCCGCACG GCGACGATCT CGCCGCCGCC CTGCACACCG CCGGGCTGGC CGACGTGGCC GACCGGCCGG TCGGCGGCTT CTCCCGTGGG ATGACCCAAC GCCTCGGGCT GGCCTGCGCG CTGGTCGGAG ACCCGCAGCT GCTGATCCTG GACGAACCGA CGTCGGCGCT GGACCCGGCC GGCCGGGCCG ACATGCTCGA TCTCATCGCC AGCATGCGCG GCCGGCGCAC GGTCGTGCTG TCCACCCACA TCCTGGCCGA CGTGCAACGG GTGGCCGACG AGGTCGGCGT CCTGCGCGCC GGGCGGCTGC TCTACCAGGG CCCGACGCGC ACCCTGATCG ATACCCACCT GCAGCCGCGA TGGCAGATCC GGATCGCCGG GGACACCACG GCGTTGCGGG CCGAGCTCGG CCGCCAGCCG TGGGTCACCG CGGTGCAGCC GGTCGGCCCG GACGCGCTGC GCGTCGAGGC CGTCTCGATC GAGGCCGGCG AGCGGGGCAT CCCGGTCGCG TTGGCCGCCG GCCGGGAGCG GCTCATCTCC TGCGAGCCGG TGGCCGCGGA TCTGGAGGCC GCGTTCCTGG CCTTGACCAC GACCGCGAAA GAGGTGATCA GCGGTGTCCA CAGCTGA
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Protein sequence | MSGRVLGAEL GEVNLPSGPA LLVLGPVLLA VLGLVIYSLV DLVRAPQVKY LPKLAWGLII VIGSAPLGAI AYLLFGRGHA ATPERPGPPA PVPAPVPGPT SALARVAVEP ALRDPILIET AALTKDYGGT GLFDVGLAIP RGCVYGLVGP NGSGKTTLLS ILAGTRHADR GTVRIALPRT AIAVCPDVPE FDGWLTATEA VNLARTMIGM PPHGDDLAAA LHTAGLADVA DRPVGGFSRG MTQRLGLACA LVGDPQLLIL DEPTSALDPA GRADMLDLIA SMRGRRTVVL STHILADVQR VADEVGVLRA GRLLYQGPTR TLIDTHLQPR WQIRIAGDTT ALRAELGRQP WVTAVQPVGP DALRVEAVSI EAGERGIPVA LAAGRERLIS CEPVAADLEA AFLALTTTAK EVISGVHS
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