Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1990 |
Symbol | |
ID | 8447599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2198375 |
End bp | 2199595 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645041118 |
Product | esterase, PHB depolymerase family |
Protein accession | YP_003201364 |
Protein GI | 258652208 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000642829 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.085302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAA ACATGACCGC CACCCTGGAC CGCGCCATGC GCCTCATCCG GGACAACGCC GCCACCGTCT CCGCCCACCG TCCGCCCGAA GGCGGGAGCG CGCCGTCGCT GCCCGATCCG ACCGGCATCC TGGCTCGGAT GGGCATTAGC TCGGGGTCCG GGCTGCCGAG GTCGGAATCG GGAACCGGCA CGTTGCCGAC CGGGCCGCCG CTGGACGTGA CCGAATTGCT CTCGTCCTTG CCGGCCGGGC TCAACCTGAA CCTGTCCGGG CAGCTGCCCG GCGGGCTCAG CTCCCTGCCC GGTGGCCTGG GGTCCCTGCC CGGGTCGGGC GCCAATCCGG CCGCAGCGGC CGCCGCGTCC GCGGCCGGCG GCGAGATCCG GCACCTGACC TACACCGGTC CGGCCGGTGC GCGGAACTAC GACCTGTACA TCCCCACCGG TTACACCGGC CAGTCGGTCC CGTTGGTCGT GATGCTGCAC GGCGGCACCC AGAATGCGAC CGATTTCGCG GCCGGCACCG GCATGAACCA CCAGGCCGAG GAGCACACCT TCCTGGTTGC CTACCCGGAG CAGTCCCGCG CGGCCAACCA CAGCGGGTAC TGGAACTGGT TCCGCCCCGA GGATCAGCAG GCCGGTTCGG GCGAGCCGGC GATCATCGCC GGCCTCACCG AGCAGATCAT CGCCGAGCAC GGCGTCGACC GGGGGCGGGT CTACGTCGCC GGGTTGTCCG CCGGCGGCGC GATGGCCTCG GTGATGGCCG CCACCTATCC CACCCTGTTC GCGGCGGCCG GCATCCATTC CGGGCTCGGC TACCGGGCCG CGACCGACAT CCCCGGGGCA TTCGGTGCCA TGCAGTCCGG GGGCTCCCCG GTCAGCAGCG GGCCGGTTCC GGTGATCGTG TTCCATGGGG CCGGGGACGG CACCGTTGCT CCGGTCAACG CCGAGAAGAT CATCGGGGCC CGGTTGGCGG CTCCCGGCAC CGGCCGGGTG CGGTCGGTCA GCACCCGGGT GGCCGACGGC GGAGGCCGCC CGCACACCCG GACGGTGCAC ACCGACGCCG ACGGGATCGT GGTGGCCGAG TCGTGGATCG TCGACGGGGG CGGCCACGCC TGGTTCGGCG GTCACTCGGC CGGCAGCTAC ACCGACCCCC AGGGGCCGAG CGCGTCGGCG GCGATGACCC GGTTCTTCCT GGCCCACAGC GCCGTCGGCA CGACCGGCTG A
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Protein sequence | MPKNMTATLD RAMRLIRDNA ATVSAHRPPE GGSAPSLPDP TGILARMGIS SGSGLPRSES GTGTLPTGPP LDVTELLSSL PAGLNLNLSG QLPGGLSSLP GGLGSLPGSG ANPAAAAAAS AAGGEIRHLT YTGPAGARNY DLYIPTGYTG QSVPLVVMLH GGTQNATDFA AGTGMNHQAE EHTFLVAYPE QSRAANHSGY WNWFRPEDQQ AGSGEPAIIA GLTEQIIAEH GVDRGRVYVA GLSAGGAMAS VMAATYPTLF AAAGIHSGLG YRAATDIPGA FGAMQSGGSP VSSGPVPVIV FHGAGDGTVA PVNAEKIIGA RLAAPGTGRV RSVSTRVADG GGRPHTRTVH TDADGIVVAE SWIVDGGGHA WFGGHSAGSY TDPQGPSASA AMTRFFLAHS AVGTTG
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