Gene Namu_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1988 
Symbol 
ID8447597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2196488 
End bp2197294 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID645041116 
ProductANTAR domain protein with unknown sensor 
Protein accessionYP_003201362 
Protein GI258652206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000129104 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.216039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG ACCGCTCCGA CCAACCCATC CCGCGCTCAC CCGACGACCG GGCGGCTCCG 
GACGAGGTCG GAGCCGTCGA CGACCCGGAC CTGGCCGACA GCCTGGCCGC GCTGGCCGGG
CTGTCCACCG CCCGGCTGGG CCTGGAGGAC CTGTTGACGC AGGTGGCGAC GTTCGCCGTG
CAGGCGATCC CCGGCGCCGA CGGCGCCGGG TTGACGCTCA TCGAATCCGA TCGCGGCGAC
ACCATCGTCA AGAGCGCGCC GTTCGTCAAG GAGATCGACG ACATCCAGTA CGGGCTGGGC
GAGGGCCCCT GCATCAGCGC CGCCGCCACC GGGCTGACCG TGCGGTCCGG ATCCCTGGGC
GGCGATCCCC GCTGGCCCCG GTTCGGTCCG CGGATCGGCC GGCTGGGCGT GCACAGCGTG
CTGTCGCTGC CGTTGCTGAC GCCGGACGGG GTGCTGGGCG CGATGAACGT CTACGCCCAC
CCCAAGGACG CGTTCGACGA ACGGGCCGAG AACATCGGAC GGCTGTTCGC GGTGCCGGCC
GCGATCGCCG TGCAGAACGC GCAGATCCTG GCCCAGGCCC AACGCGTGAC CTCCCACCTG
CAGGCCGCCC TGACCAACCG CGCGGTGATC GACCAGGCCA TCGGCATCAT CATCAGCCGC
ACCGGCGTCA CCCCGGACGG CGCGTTCGCC CGGCTGCGCG CCCTGAGCCA GACCGAGCAC
GTGAAGTTGT CCGTGGTGGC CTCCCGCATC GTTCAGGAGG CCGCCCGGCG CGCCCGGGCC
CGGCACGAGA ACCCCCCTCG TCCCTGA
 
Protein sequence
MDADRSDQPI PRSPDDRAAP DEVGAVDDPD LADSLAALAG LSTARLGLED LLTQVATFAV 
QAIPGADGAG LTLIESDRGD TIVKSAPFVK EIDDIQYGLG EGPCISAAAT GLTVRSGSLG
GDPRWPRFGP RIGRLGVHSV LSLPLLTPDG VLGAMNVYAH PKDAFDERAE NIGRLFAVPA
AIAVQNAQIL AQAQRVTSHL QAALTNRAVI DQAIGIIISR TGVTPDGAFA RLRALSQTEH
VKLSVVASRI VQEAARRARA RHENPPRP