Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1923 |
Symbol | |
ID | 8447530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2117764 |
End bp | 2118903 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645041053 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_003201301 |
Protein GI | 258652145 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0918656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000244242 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCTGC TGCACACCTC GGACTGGCAC CTCGGTCGCA CCTTCCACGG GCAGAATCTG CTGCCCGACC AGGAAGCGGT GCTCACCGCG CTCGCCGACC TGGCCGCGGA GCACCGGGTC GACGCCGTCC TGATCTCCGG CGATCTGTAC GACCGGGCGG TGCCGTCGCC GGAGGCCGTG CAGACCGCGT CCCGGATCCT GGCCCGGATC CGGGCGGCCG GCATCACCGT CGTCGCGATC GCCGGGAACC ACGACTCGGC GCCCCGCCTG GGCGCCTTCA CCGACTTCCT GGCCGCCGGC GGCCTGCACC TGGGCGCCGC GGCCGCCGAC GTCGGCACCC CGGCCGTGCT GCCCGATCCC GACGGCGACG TCGTCATCTA CCCGATCCCG TTCCTGGAAC CGGATCTGCT GCGCTCCGGA TGGGCGCTGC CGGCCGGATC CGGGCACGAA GCGGTGCTGG CCCGGGCCAT GGACCTGGTC CGCGCCGACC TGGCCGCGCG GCCGCCGGGC ACCCGATCGG TGGTGCTGGC CCACGCCTTC GTCGTCGGTG GCCGCGCCGG CGGATCGGAA CGATCGATCG CGGTCGGCGG GGTGGAGTCG GTCAGCGCGG ACCTGTTCGC CGGATTCGAC TATGTCGCCC TGGGCCACCT GCATCGCCCC CAGGTGCTGG CCGACCGGAT CCGCTACTCG GGATCCCCCT TGCCCTACTC GTTCTCCGAA GCCGATCACG AGAAGGGCGT GTGGCTGGTC GATCTGGACG CCGTCGGCGG GGTCAGCGCG ACCCGGCTGA CCCTGCCGAC GATCCGCCGG CTGGTCTGCC GGCGCGGCCG CCTGGCCGAG ATCCTGGACA CCGAGCCCGA TCTGGCCGAT GCTTATCTCT CGGTCGAGCT CACCGATCCG GTGCGGCCGG TGGACCCGAT GCGGCGGCTG CGGGAGGTCC TGCCCTACAC GCTGGTCGCC ACCTGGGTCG GCGGTTCCCC GGCGCCGGCC GCGTGGCCGG CCGCCCCCGC GGTCCCGACC GGCCACGACG ACGCCGACCT GCTGCACGAT TTCGTCCGCG ATGCCTGCGG GCGGCCGGCA TCGACGGCCG AACGCGACCT GCTGGACGAG GCCCTGCGCG CGTTGCGGAT ACCGGCATGA
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Protein sequence | MRLLHTSDWH LGRTFHGQNL LPDQEAVLTA LADLAAEHRV DAVLISGDLY DRAVPSPEAV QTASRILARI RAAGITVVAI AGNHDSAPRL GAFTDFLAAG GLHLGAAAAD VGTPAVLPDP DGDVVIYPIP FLEPDLLRSG WALPAGSGHE AVLARAMDLV RADLAARPPG TRSVVLAHAF VVGGRAGGSE RSIAVGGVES VSADLFAGFD YVALGHLHRP QVLADRIRYS GSPLPYSFSE ADHEKGVWLV DLDAVGGVSA TRLTLPTIRR LVCRRGRLAE ILDTEPDLAD AYLSVELTDP VRPVDPMRRL REVLPYTLVA TWVGGSPAPA AWPAAPAVPT GHDDADLLHD FVRDACGRPA STAERDLLDE ALRALRIPA
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