Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1869 |
Symbol | |
ID | 8447476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2054372 |
End bp | 2055463 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040999 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_003201247 |
Protein GI | 258652091 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.229178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00819501 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCGCAGT TCCGGCGCGA ACAGCACCCC TCGCCGGTGA GCGTGAGCCG CCGGGACGAA ATTCACGCCG CTCCCGGCTT CGGCCGCTAC TTCACCGATC ACATGGTGCT GATCGACTAC GACCAGGGGC AGGGCTGGCA CGACCCGCGC GTCGTGCCTT ACGGGCCGTT CAGCCTGGAT CCGGCGACCA TGGTGCTGCA CTACGGCCAG GAGATCTTCG AGGGGCTCAA GGTCTTCGCG CAGGCCGACG GCACCCTCGC GGCGTTCCGG CCGGAGGCGA ACGCGGCCCG GTTCAACCGC TCGGCCGTGC GCCTGGCCGT CCCCGAACTG CCCGAAGAAC TGTTCCTGGC CAGCATCCGC GAGCTGCTCG CCGTCGACGG GGCGTGGGTG CCCTCGGGCG GCGAGTCGTC GCTGTACCTG CGGCCGTTCA TCATCGCCAC CGAGGTCGGC CTGGGGGTGC GGCCCTCGGC CAGCTACCTG TTCTGCCTGA TCGCCTCGCC GGTGGGGGGC TATTTCGCCC GCGGCGTGCA GCCGGTCAGC GTCTGGTGGT CGACCGAGTA CGTCCGCGCG GTGCCCGGCG GCACCGGGGC GGCCAAGTTC GGCGGGAACT ACGCCGCCTC CCTGGCCGCG CAGGCGCAAG CCGCGGAGAA GGGCTGCGAC CAGGTCGTCT GGCTGGACGC CGTCGAGCGG CGCTGGGTCG AGGAGATGGG CGGGATGAAC CTGTTCTTCG TGATGGGCTC GGGGCCCACC GCGGAGCTGG TGACCCCTGA GCTGTCCGGC TCGCTGCTGC CCGGCATCAC CCGCGATTCA CTGCTGACCA TGGCTCGCGA GCTGGGCTAC GGCGCGGTCG AGCGGCGGAT CTCCACCGAC GAGTGGGCCA AGAAGGTCGA GAGCGGCGAG CTGACCGAGG TCTTCGCCTG CGGCACGGCG GCCGTGATCA CCCCGGTCGG CTCGGTGCTG CACGCCGAGG GCGGCTTCGA GATCAACGGC GGGCAGCCGG GGCCGATCAC CATGCAGCTG CGGGAGAAGC TCACCGACAT CCAGTACGGC CGGGCCGCCG ACACCCACCG GTGGATCACC AAGCTGGGCT GA
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Protein sequence | MPQFRREQHP SPVSVSRRDE IHAAPGFGRY FTDHMVLIDY DQGQGWHDPR VVPYGPFSLD PATMVLHYGQ EIFEGLKVFA QADGTLAAFR PEANAARFNR SAVRLAVPEL PEELFLASIR ELLAVDGAWV PSGGESSLYL RPFIIATEVG LGVRPSASYL FCLIASPVGG YFARGVQPVS VWWSTEYVRA VPGGTGAAKF GGNYAASLAA QAQAAEKGCD QVVWLDAVER RWVEEMGGMN LFFVMGSGPT AELVTPELSG SLLPGITRDS LLTMARELGY GAVERRISTD EWAKKVESGE LTEVFACGTA AVITPVGSVL HAEGGFEING GQPGPITMQL REKLTDIQYG RAADTHRWIT KLG
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