| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1852 |
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| Symbol | |
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| ID | 8447459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2037581 |
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| End bp | 2038243 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645040982 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_003201230 |
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| Protein GI | 258652074 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00865228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0578281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACAAGC CCGGCCACCA GATGCCCCTG GGCGTCGCCC ACGGCGAGGC GTTGTCCCTG
CCGCAGGCCC GCTACATCCT GCCGTCGTTC GTCGAGCGCA CCAGCTACGG CGTCAAGGAG
TCCAACCCCT ACAACAAGCT CTTCGAGGAA CGCATCATCT TCCTCGGCGT GCAGATCGAC
GACGCGTCCG CCAACGACGT GATGGCCCAG CTGCTCACGC TGGAGTCCAC CGACCCGGAC
CGCGAGATCA TCATGTACAT CAACTCGCCC GGTGGCTCGT TCACCTCGAT GACGGCGATC
TACGACACGA TGCAGTTCGT GCGGCCGCAC ATCCAGACCG TCTGCCTGGG CCAGGCCGCG
TCCGCCGCGG CCGTACTGCT GGCCGCGGGC AGCCCCGGCC GCCGGCTGGC CCTGCCGAAC
TCGCGGATCC TGATCCACCA GCCGGCCACC GAGGGCGTCT ACGGCCAGGT GTCCGACCTG
GAGATCCAGG CCAAGGAGAT CGGCCGGATG CGGGCGGCGC TGGAGGAGAT CCTGTCCCGC
CACTCCACCA AGACCCCGGA GGAGGTCCGC AAGGACATCG ACCGGGACAA GATCCTGACG
GCGGCCGAGG CCAAGGACTA CGGGCTCATC GACGAGGTCC TGCAGTACCG CAAGCTCTCC
TGA
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| Protein sequence | MNKPGHQMPL GVAHGEALSL PQARYILPSF VERTSYGVKE SNPYNKLFEE RIIFLGVQID
DASANDVMAQ LLTLESTDPD REIIMYINSP GGSFTSMTAI YDTMQFVRPH IQTVCLGQAA
SAAAVLLAAG SPGRRLALPN SRILIHQPAT EGVYGQVSDL EIQAKEIGRM RAALEEILSR
HSTKTPEEVR KDIDRDKILT AAEAKDYGLI DEVLQYRKLS
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