| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1840 |
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| Symbol | |
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| ID | 8447445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2023138 |
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| End bp | 2024742 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645040969 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_003201219 |
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| Protein GI | 258652063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000489986 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.328535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAAT CCACCGACCA CGGCTCCACC GACTACGACT CCACCGATTA CGACTCCACC
GATTACGACG TTGTCATCAT CGGTTCCGGC GCCGGGGGCG GCACGCTCGC CCACCGGCTG
GCGCCCTCCG GCAAGCGGAT CCTGATCCTG GAGCGGGGTG ACTGGCTGCC CCGGGAGGTG
CAGAACTGGG ATGCCACCGC GGTCTTCGTC GACAACCGGT ACGTCTCGGC CGACACCTGG
TACGACGCCG ACGGTAAGTC CTTCCAGCCG CAGATCCACT ACAACGTCGG CGGCGCCACC
AAGCTTTACG GCGCGGCGCT GTACCGGTTG CGGGAGAAGG ACTTCGGCGA ACTCATCCAC
TTCGACGGGA TCTCCCCCGC GTGGCCGGTG AGCTACGCCG ACTTCGAGCC GTACTACGCG
CAGGCCGAGC AGCTCTACCA GGTGCACGGG CAGCGGGGCG AGGATCCCAC CGAACCACCG
AGTTCGGGAC CGTATCTTTT TCCGGCGGTC TCGCACGAGG CGCGGATCCA GCAGCTGTAC
GACGATCTGC GGGCCAGCGG GCTGCATCCG TTCCACGCCC CGGCCGGCAT CATGCTCAAC
GAGGCGGACA TGGCCTACAG CCGGTGCATC CGCTGCGCCA CCTGCGACGG TTTCCCGTGC
CTGGTGCACG CCAAGTCCGA CGCCGAGGTG GTCGCGGTCC GCCCGGCCCT GACGCACCCT
AACGTCACGC TGATCCGCGG CGCCGAGGTG ATCCGGCTGG ACACCGACCT GACCGGACGC
TCGGTCACCG ACGTGGTGGC CATGATCGGC GGCGAGCGGC ACCGCTTCCA CGGTTCGATC
GTGGTGGTCA GCGCCGGCGC GGCCAACTCG GCCAAGCTGT TGCTGCGCAG CGCCTCCGAC
CGGCATCCGA ACGGGCTGGC CAACGGTTCG GACCAGGTCG GGCGCAACTA CGTCTTCCAC
AACAGCCGGG CGTTCCTGGC CGTGTCGACC GAGCGCAACG ACACCCGCTT CCAGAAGACC
CTGGGGGTCA ACGACTTCTA CTTCGGCGAC GACGAGTTCG ACTACCCGAT GGGCAACATC
CAGATGGTCG GCAAGAGCTC GGCGCCGATG TACCGGGGCG AGAAGCCACT GGAGACCGCC
CTGGCCCCCT CCTTCGCCCT GTCCGACGTG GCCGTGCACG CGGTGGATTT CTGGCTGTCC
ACCGAGGATC TGCCTCGGCC GGAGAACCGG GTCACGCTGG CCGCCGACGG GAACATCACC
CTGTCCTACA CGCCGAACAA CACCAAGCCG CTGGACGAGC TCTACCACCG GATCAAGCGC
CGGCTGAGCC ATCTCGGGCT GAACCCGCAT CACCTGATCC CGCGTTCGGC CTACATGAAG
AACGACATCC CGATCGCCGG GGTGGCCCAC CAGGCCGGTA CCTGCCGTTT CGGCAGCGAT
CCGGCCGACT CGGTGCTGGA CACCGACTGC AAGGCCCACG AGCTGGACAA CCTGTACGTG
GTGGACACCA GCTTCTTTCC CTCGATCGGT GCGGTGAACC CGGCGCTGAC CGCGGCGGCC
AACGCGTTGC GGGTGGGCGA CCACCTGCTG GACCGGCTGG GCTGA
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| Protein sequence | MPESTDHGST DYDSTDYDST DYDVVIIGSG AGGGTLAHRL APSGKRILIL ERGDWLPREV
QNWDATAVFV DNRYVSADTW YDADGKSFQP QIHYNVGGAT KLYGAALYRL REKDFGELIH
FDGISPAWPV SYADFEPYYA QAEQLYQVHG QRGEDPTEPP SSGPYLFPAV SHEARIQQLY
DDLRASGLHP FHAPAGIMLN EADMAYSRCI RCATCDGFPC LVHAKSDAEV VAVRPALTHP
NVTLIRGAEV IRLDTDLTGR SVTDVVAMIG GERHRFHGSI VVVSAGAANS AKLLLRSASD
RHPNGLANGS DQVGRNYVFH NSRAFLAVST ERNDTRFQKT LGVNDFYFGD DEFDYPMGNI
QMVGKSSAPM YRGEKPLETA LAPSFALSDV AVHAVDFWLS TEDLPRPENR VTLAADGNIT
LSYTPNNTKP LDELYHRIKR RLSHLGLNPH HLIPRSAYMK NDIPIAGVAH QAGTCRFGSD
PADSVLDTDC KAHELDNLYV VDTSFFPSIG AVNPALTAAA NALRVGDHLL DRLG
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