Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1824 |
Symbol | |
ID | 8447429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2003820 |
End bp | 2004812 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040953 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003201203 |
Protein GI | 258652047 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000045049 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0757476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCA CCGCGCCGGA GTGCGCGTCC GATCCCGGAT CGCTGTGCCA GTGGGTCTGG GACAACACCG GGGCCGATTT TCTCGCCCGC AACAGCGACC AGGTGGCCTC GTCCACCCTG CACATCGCCG CGATCGTGTT GATTGCCGTC GTCGTGCGGT TCCTGGCCTA CCGGGCGATC AACCGGCTCA CCCGGCTGTC CACCGAGGAC GGCACCTCGG CGGCCCTGCG GCCGTTGCGG GCCGGCGCCC GGTTCGCCCT GGCCGGCGGG TTGGCCGCGG ATCGGCGGGC CCAGCGCACG CAGGCCGTCG GCTCGCTGCT CAAGTCGGTG ACCTCGTTCG CGGTGATCTG CATCGCCGTG GTGCTGATCC TGGCCGAACT GGGCTTCGAC GTGGCGCCGA TCCTGACCTC GGCCGGCATC GCCGGCGTCG CGCTCGCCTT CGGCGCGCAG AACCTGGTCC GGGACTTCCT GGCCGGGATC TTCATGACCC TGGAGGACCA GTACGGCGTC GGCGACACCG TCGACCTGGG CTCGGCCAGC GGCACCGTGG TCGCGGTCAG CCTGCGCACG ACCACCCTGC GGGCCGGCGA CGGCACGATC TGGCACGTGC GCAACGGTGA GGTGCTGCGG GTCGGCAACT CCAGCCAAGG TCAGGCCGTG GTCACCATCC CGATCACCGT GCCCTACGAC AGCGACACCG ACCGGGCCGC GACGATCGCC CTGGAGCAGG CCACGGCGGT GGCCCAGACC CCGCAGTTCG AGTCCTCGGT GCTGGTCGAA CCCACGCTGC TGGGCATCAC CGACGTCGCC CCCGGGACCG TCACCCTGGG CCTGCAGGCC ACCGTGGTCA CCGGCGACAA GGACGCCTAC ATCCGCGCCG TGCGCTCGGC GATCCGCCGC TCGTTCGAGC AGGCCCGCAA GGACGACCCG ACGGCCGACT TCCGGCCGCC GTTGCTGGCC GGCGAGCCGG CGCCGGGGAG CCCCCGACCG TGA
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Protein sequence | MEITAPECAS DPGSLCQWVW DNTGADFLAR NSDQVASSTL HIAAIVLIAV VVRFLAYRAI NRLTRLSTED GTSAALRPLR AGARFALAGG LAADRRAQRT QAVGSLLKSV TSFAVICIAV VLILAELGFD VAPILTSAGI AGVALAFGAQ NLVRDFLAGI FMTLEDQYGV GDTVDLGSAS GTVVAVSLRT TTLRAGDGTI WHVRNGEVLR VGNSSQGQAV VTIPITVPYD SDTDRAATIA LEQATAVAQT PQFESSVLVE PTLLGITDVA PGTVTLGLQA TVVTGDKDAY IRAVRSAIRR SFEQARKDDP TADFRPPLLA GEPAPGSPRP
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