| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1799 |
|---|
| Symbol | |
|---|
| ID | 8447404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1974440 |
|---|
| End bp | 1975048 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645040928 |
|---|
| Product | putative signal transduction protein with CBS domains |
|---|
| Protein accession | YP_003201178 |
|---|
| Protein GI | 258652022 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0446245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0519326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAG CACGAGATGT GATGTCCCGC CCGGTGGTCA CCGTGACCCC GGCGACGACG
GCCGCGGACG CGGCCAGGCT GCTGTGTGCC CACGGTTTCA CGGCCCTGCC GGTGGTCGAG
GGGGACGGTC TGGTCGGGAT CGTCACCGAG GCCGATCTGA TCGACGACCC GGGTGGGTCG
CTGCACCCCC GCCCGGGCCG GCACGAGGCG GCATCCTCGG AACTACTGGT CCGGGACGTG
ATGAGCGCGC CCGTGCGGTC GTTGACCAAG ACCGCCGACG TGGCCGACAC CGCGGCGATG
ATGGTTCGGG ACCGGATCCG GAGCCTGCCG GTGGTCGACG GTGGGCGCGT GATCGGGATC
GTCACCCGCC GCGACCTGCT GCGCGCGGGG CTGGCCCACA TCGACCAGGA TCTGGCCGAC
GAGATCAGCC GGCAGCTGGC CCAGGTGGAC ACGCCGAACC GGTGGCGGGT CACCGTCGAG
GACGGCGTGG CCGATATCGA GGACTACGGC AGCGATGTCG AGGACCGTGA ACGGGCCGCC
CGACTCGCGG CCGAGGTCCC CGGAGTGGCC GCCGTGCGTG CGCGGCATCA GACGCCGGAT
CCGTTCTGA
|
|---|
| Protein sequence | MMQARDVMSR PVVTVTPATT AADAARLLCA HGFTALPVVE GDGLVGIVTE ADLIDDPGGS
LHPRPGRHEA ASSELLVRDV MSAPVRSLTK TADVADTAAM MVRDRIRSLP VVDGGRVIGI
VTRRDLLRAG LAHIDQDLAD EISRQLAQVD TPNRWRVTVE DGVADIEDYG SDVEDRERAA
RLAAEVPGVA AVRARHQTPD PF
|
|---|
| |