| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1781 |
|---|
| Symbol | |
|---|
| ID | 8447384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1956442 |
|---|
| End bp | 1957497 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040908 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_003201160 |
|---|
| Protein GI | 258652004 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000215592 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.125783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG TCCTCACCCC CACCGACGTC CACCGCGCAC CCGAACCGCT TGAGCAACGA
ATCCGCCGTC ACCCGCACAC GTTTCGCGTG CTCTCGGGCG ATCGACCCAC CGGTGCGCTG
CATCTGGGCC ACTATCTGGG CACTTTGCGC AACCGGGTCC AGCTGCAGAA CCTCGGCGTG
CCCGTCGTCG TCGTCATCGC CGACTATCAG GTCATCACGG ACCGCTCGGA TCTCGGGCCG
GTCCGCGACC GGGTGCGCAC CCTGGTCGCC GAATACCTGG CCGCCGGGCT CGATCCGGCC
CGCAGCGTGA TCTTTCCGCA CTCCGCGGTC GCGGCCCTGA ACCAGCTGAT GCTGCCATTT
CTGTCGCTGG TCACCGACGC CGAACTGCGC CGCAACCCCA CCGTCAAGGC CGAGGCACTG
GCATCCCGGC GGCCGTTGGG CGGGCTGCTG CTGACCTACC CGGTGCATCA GGCGGCCGAC
ATCCTGGGGG TGGGCGGCAC GGTCGTGCCG GTGGGGCGTG ACCAGCTCCC GCACCTGGAG
CTGACCCGGG TCATCGCCCG GCGGTTCAAC GAGCGCTACG GGCCGGTGTT CGCCCTGCCC
GAGCCGTTGC TGAGCGGCAC GCCGAACCTG CTGGGTACCG ACGGCGCGAA GATGTCCAAG
ACCCGCGGCA ACACGATCGC CCTGGGTGAC ACCGCGGACC GGACCGCAGC GATCGTCCGG
GCCGCGCAGA CCGACTCGAC CCGCCGGATC ACCTTCGAAC CGACCAGTCG ACCCCAGGTT
GCCAACCTGC TGGCGATCAT CGGCGAGATC ACCGGTCGCG ACCCGGCAGC GGTCGCCGAC
GAGATCGGGG ACGGGGGAGC GGCCGAGCTC AAACGGCAGG CCATCGAGAC CATCAACGAG
GAGCTGGCAC CGCTGCGGCG CCGCCGCGCC GAGCTGCTCG CCGATCCGGT CCAGTTGGAC
GGGGTGCTGC TCGACGGCAT CGCGGCGGCG ACCGCCGTGG CCGGGGACAC CCTGGCTCGG
GTGCGCAGTG CGATGGGGAT GGACTACCTG CGATGA
|
|---|
| Protein sequence | MTAVLTPTDV HRAPEPLEQR IRRHPHTFRV LSGDRPTGAL HLGHYLGTLR NRVQLQNLGV
PVVVVIADYQ VITDRSDLGP VRDRVRTLVA EYLAAGLDPA RSVIFPHSAV AALNQLMLPF
LSLVTDAELR RNPTVKAEAL ASRRPLGGLL LTYPVHQAAD ILGVGGTVVP VGRDQLPHLE
LTRVIARRFN ERYGPVFALP EPLLSGTPNL LGTDGAKMSK TRGNTIALGD TADRTAAIVR
AAQTDSTRRI TFEPTSRPQV ANLLAIIGEI TGRDPAAVAD EIGDGGAAEL KRQAIETINE
ELAPLRRRRA ELLADPVQLD GVLLDGIAAA TAVAGDTLAR VRSAMGMDYL R
|
|---|
| |