| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1776 |
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| Symbol | |
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| ID | 8447378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1947622 |
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| End bp | 1949778 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645040902 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003201155 |
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| Protein GI | 258651999 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.191926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0421989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC TGGTCCATGA CGATCTGGCG CACCTCTGTG CCGGCGGTGT CAGCGTCGTC
CTGGATACAG CGGGAGGCGG TCTCCCGACG GTCCTGTACT GGGGACCCGC TTTGAGTGAA
CTGTCGTCGG CAGATCTGGT CGAGCTCCGG CGAGCAACTC AGGCTCCGTT CGGCGATAGC
CGCATCGACG TCCCCGAACG GGTGAGTGTG CTTCCCACCC CCGCCGAAGG GTGGGTCGGC
CGCCCGGGAA TCGCCGGAAG CTCGAATGGA CAGGCATTCT CACCGCTGTT CCGACTTCTT
GTGACCGAGA TTGTCGAACG GAGCGAGACG GTGGCGACCG GTTTTCGCTA TCACGCCGCC
GACCCGACGG CCGAGCTGGA CCTGGCCCTG GACGTCGAGT TGACCCACTC CGGACTGGTG
CGGCTGCGGG CCGCGTTGAT CAATCAGGGG TCATCGACCT ATCAGCTGGA CGGCCTGGTG
CTGGCACTGC CGGTGCCGAC CCGGGCCGAT GAGCTGTTCG ACTTCACCGG TCGGCATACC
CGGGAGCGGT CGCCGCAGCG CTCACCCTTC CAGGTCGGTA CCCACGCTCG CGAGTCCCGG
CAGGGACGGC CCGGATTGGA CTCTCCGTTC CTGCTGGCCG CGGGGACGAC CGGCTTCGGT
TGGGAGTCCG GTCAGCTCTG GGGATTGCAC GTCGGCTGGT CCGGCAACCA GGTCAGCTAT
GCCGAGCGGA TGTACAACGG GCTGAAGATG ATTGGCGGCG GAGAGCTGAT CCTGCCGGGC
GAGGTACGGC TTGAACGTGG CGAAGGTTAC GAATCACCCT GGCTCTACGG TGTCTTCGGC
AGCGGTCTGA ACGAGGTCAG TCGGCGGTTC CATCGGTTCC TGCGCTCGCG GCCCAGGCAT
CCGCGGACCG AGCGGCCCGT GCTGGTCAAC ACCTGGGAAG CGGCCTACTT CGACCACGAT
CTGCCGCGGC TGCTGGAATT GGCCGAGCGC GCTGCCCACG TCGGGGTGGA GCGATTCGTG
CTCGACGATG GCTGGTTCCT CGGCCGTCGG CATGACTCGG CCGGTCTGGG CGACTGGCAG
GTCGACCCCA CCGTCTGGCC CAACGGCCTC AAACCGCTGA TTCATCGTGT CGAAGAGCTA
GGCATGCAGT TCGGCCTGTG GGTCGAGCCG GAGATGATCA ACCTTGATTC CGAGCTCGCT
CGTGAACATC CGGAGTGGAT CTTCCGCGCC GGTGGACGGG AGGGCATCGC CACTCGGCAA
CAGCATGTGC TTGATCTGGG TCACCCGGAG GCCTACGCAC ATATCGCGGG GTGCCTGCAC
GCACTGTTGA ACGAGTACAA CATCGGCTAC CTGAAGTGGG ACCACAACCG GATGGTGGTC
GAGGCGGGTC ATTGGCCCAC CGGCGTTCCG GGCGTGCATC GCCATACCTT GGCGGTCTAT
CGGTTGATGG ACGAACTCCG AGCGGCTCAT CCCGGTCTGG AGATCGAGTC GTGCGCGGGC
GGCGGCGGCC GGATCGACCT GGAGATCCTC AACCGGACCG ACCGGGTCTG GCCCAGCGAC
TGCATCGATG CCCTTGAGCG CCAACAGATC CAGCGGTACA CCCAGCTCCT CCTCCCGCCG
GAGCTGGTGG GCACGCACTT GGGTGACGCG GAGGCCCACT CGACCCGGCG TCGGCACCAC
CTCGGATTCC GGGCGGCGGC CGCCATCTGG GGGCACATGG GCATCGAGTG GGACCTGACC
TCGACCAGTC CCGGCAAGCT GGACCAAGTG CGTCGCTGGG TCGAGTTGCA CAAGCAGTTG
CGCCCTCTGC TCCATTCCGG GGACGTTGTC GTCGGCGACC ATCCCGATCC GGCCGTATGG
ATCAACGGTG TGGTCGCGGT GGACCAGTCC GACGCCGTCT TTGGCATCAC CACCGTCGGT
CGATCGGTCA CCTTCCCGCC GGGCCGGGTC AGTCTTCCCG GCCTGGATCC GGTCAAACGC
TATCGGGTGC AGCCCCTTCC ACCGTCCGAC CACTACCCCG GCACCAACCA GTATCCCGGT
TGGTGGGACG AAGGCGTCGT CCTGTCGGGT CGAACCCTGC GCGAAGTCGG CGTGCAGATC
CCCGCGATGT TCCCCGAGTA CACCCATATC CTCCGCGCCC GCGCCGTGTC GGCGTGA
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| Protein sequence | MPELVHDDLA HLCAGGVSVV LDTAGGGLPT VLYWGPALSE LSSADLVELR RATQAPFGDS
RIDVPERVSV LPTPAEGWVG RPGIAGSSNG QAFSPLFRLL VTEIVERSET VATGFRYHAA
DPTAELDLAL DVELTHSGLV RLRAALINQG SSTYQLDGLV LALPVPTRAD ELFDFTGRHT
RERSPQRSPF QVGTHARESR QGRPGLDSPF LLAAGTTGFG WESGQLWGLH VGWSGNQVSY
AERMYNGLKM IGGGELILPG EVRLERGEGY ESPWLYGVFG SGLNEVSRRF HRFLRSRPRH
PRTERPVLVN TWEAAYFDHD LPRLLELAER AAHVGVERFV LDDGWFLGRR HDSAGLGDWQ
VDPTVWPNGL KPLIHRVEEL GMQFGLWVEP EMINLDSELA REHPEWIFRA GGREGIATRQ
QHVLDLGHPE AYAHIAGCLH ALLNEYNIGY LKWDHNRMVV EAGHWPTGVP GVHRHTLAVY
RLMDELRAAH PGLEIESCAG GGGRIDLEIL NRTDRVWPSD CIDALERQQI QRYTQLLLPP
ELVGTHLGDA EAHSTRRRHH LGFRAAAAIW GHMGIEWDLT STSPGKLDQV RRWVELHKQL
RPLLHSGDVV VGDHPDPAVW INGVVAVDQS DAVFGITTVG RSVTFPPGRV SLPGLDPVKR
YRVQPLPPSD HYPGTNQYPG WWDEGVVLSG RTLREVGVQI PAMFPEYTHI LRARAVSA
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