Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1774 |
Symbol | |
ID | 8447376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1945628 |
End bp | 1946593 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645040900 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003201153 |
Protein GI | 258651997 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.331595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.245423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCAC ACAATCCGCC GGTGTCGATC GAGGCGCTGG ACGCGCACGA CGACATCCAG CACGGGAGCC ACCCCGAACC GAAGGAGGGC CGACGGTTCT CCTGGGGACG GCTGTTCGTC TGGGTGGTTG CGATCGGATT CATGTTTGTA ACCCTGTTCC CGTTCTACTG GATGGCGCGG ACTGCGTTCT CCAACGGCGC GCTGCTGGCC ACCGAACCGG GAAGTCTGCT GCCGGTCGAC CCGACCCTGG GTGCGTTCAA ACGGGTCCTT GGTCTGGGCA CGATCGAACA GGCGCAAGCC GAGGGTGGTT CCGGCGCATC GGTGAACTTC TGGCTCGCCC TGCGGAACTC GATCATCATC GCCACCACCG TGACAATCGG CCAGACCCTG TTCTGCGCGA TGTCCGCCTA CGCCTTCTCG CGCCTGCAGT GGCCGGGACG CGACGTGGTG TTCGGAGTGT TCCTGGCCGC CCTGTTCGTG CCACCGATCT TCACCAGCCT GCCCAACTTC ATCCTAATGA ACAACCTCGG CCTGTTGAAT ACCCTGCCCG GCATCATCCT GCCGACTCTG TTCATGACCC CGTTCGCTGT GTTCTTCCTG CGGCAGTTCT TCCTCGGCCT GAGTCGGGAG GTGGAGGAAG CGGCGAAGAT CGACGGCGCC GGGAACTTCC GGATCTTCTT CCGGCTGATC GTGCCGATGA GCGCGGCACC GATCACCACC CTGGCGATCC TGACCTTCAT CAACACCTGG AACGACTACC TGTGGCCGTT GCTGATCGCC CGGGACGAGT CGGCCCAGAC CCTCATCCTG GCGCTGGGCA TCTTCCGCTC CCAGACCCCG GGTGGGTCAC CGGACTGGCC CGGCCTGATG GCCATGACCC TGCTCGCGGC CCTGCCCATC ATCATCCTGT TCATCATCTT CGGGCGGCGC GTCGTGAACT CCATCCAGTT CTCGGGCATC AAGTAA
|
Protein sequence | MTSHNPPVSI EALDAHDDIQ HGSHPEPKEG RRFSWGRLFV WVVAIGFMFV TLFPFYWMAR TAFSNGALLA TEPGSLLPVD PTLGAFKRVL GLGTIEQAQA EGGSGASVNF WLALRNSIII ATTVTIGQTL FCAMSAYAFS RLQWPGRDVV FGVFLAALFV PPIFTSLPNF ILMNNLGLLN TLPGIILPTL FMTPFAVFFL RQFFLGLSRE VEEAAKIDGA GNFRIFFRLI VPMSAAPITT LAILTFINTW NDYLWPLLIA RDESAQTLIL ALGIFRSQTP GGSPDWPGLM AMTLLAALPI IILFIIFGRR VVNSIQFSGI K
|
| |