Gene Namu_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1774 
Symbol 
ID8447376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1945628 
End bp1946593 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID645040900 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003201153 
Protein GI258651997 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.331595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.245423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC ACAATCCGCC GGTGTCGATC GAGGCGCTGG ACGCGCACGA CGACATCCAG 
CACGGGAGCC ACCCCGAACC GAAGGAGGGC CGACGGTTCT CCTGGGGACG GCTGTTCGTC
TGGGTGGTTG CGATCGGATT CATGTTTGTA ACCCTGTTCC CGTTCTACTG GATGGCGCGG
ACTGCGTTCT CCAACGGCGC GCTGCTGGCC ACCGAACCGG GAAGTCTGCT GCCGGTCGAC
CCGACCCTGG GTGCGTTCAA ACGGGTCCTT GGTCTGGGCA CGATCGAACA GGCGCAAGCC
GAGGGTGGTT CCGGCGCATC GGTGAACTTC TGGCTCGCCC TGCGGAACTC GATCATCATC
GCCACCACCG TGACAATCGG CCAGACCCTG TTCTGCGCGA TGTCCGCCTA CGCCTTCTCG
CGCCTGCAGT GGCCGGGACG CGACGTGGTG TTCGGAGTGT TCCTGGCCGC CCTGTTCGTG
CCACCGATCT TCACCAGCCT GCCCAACTTC ATCCTAATGA ACAACCTCGG CCTGTTGAAT
ACCCTGCCCG GCATCATCCT GCCGACTCTG TTCATGACCC CGTTCGCTGT GTTCTTCCTG
CGGCAGTTCT TCCTCGGCCT GAGTCGGGAG GTGGAGGAAG CGGCGAAGAT CGACGGCGCC
GGGAACTTCC GGATCTTCTT CCGGCTGATC GTGCCGATGA GCGCGGCACC GATCACCACC
CTGGCGATCC TGACCTTCAT CAACACCTGG AACGACTACC TGTGGCCGTT GCTGATCGCC
CGGGACGAGT CGGCCCAGAC CCTCATCCTG GCGCTGGGCA TCTTCCGCTC CCAGACCCCG
GGTGGGTCAC CGGACTGGCC CGGCCTGATG GCCATGACCC TGCTCGCGGC CCTGCCCATC
ATCATCCTGT TCATCATCTT CGGGCGGCGC GTCGTGAACT CCATCCAGTT CTCGGGCATC
AAGTAA
 
Protein sequence
MTSHNPPVSI EALDAHDDIQ HGSHPEPKEG RRFSWGRLFV WVVAIGFMFV TLFPFYWMAR 
TAFSNGALLA TEPGSLLPVD PTLGAFKRVL GLGTIEQAQA EGGSGASVNF WLALRNSIII
ATTVTIGQTL FCAMSAYAFS RLQWPGRDVV FGVFLAALFV PPIFTSLPNF ILMNNLGLLN
TLPGIILPTL FMTPFAVFFL RQFFLGLSRE VEEAAKIDGA GNFRIFFRLI VPMSAAPITT
LAILTFINTW NDYLWPLLIA RDESAQTLIL ALGIFRSQTP GGSPDWPGLM AMTLLAALPI
IILFIIFGRR VVNSIQFSGI K