Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1772 |
Symbol | |
ID | 8447374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1942767 |
End bp | 1943927 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040898 |
Product | ROK family protein |
Protein accession | YP_003201151 |
Protein GI | 258651995 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.415249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.404833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC GGACCGAGTC CTTTCCAGCC CTGTCCGAGG GCTCCCGGGC CGCGCTCGTC CGGCTGCTGG TCCATGGCCC GGCGTCCCGG GCCGATCTGG CCCGGCGGCT TCGTCTCTCA CCCGCGAGCC TGACCCGGAT CGTGCGCACG CTGGAGGACA GCGGCCTCGT GGTGGAGTCC GAGACCACCG TGCCGCAGCG GATGGGTCGC CCGTCCCAGG CGATGGAAGT CAACGTTGAC GCCGTCCACC TCGTCGGCAT CAAGCTCCTG GCCGGCGAGA TCAATCTGGT TCGCACCGAC ATGCGCAGCA CGGTGCTCGG CCACCGGACC ATCCCTCTGC AGACCGTCCC GCTGGATCCG GCCATCGACC GGATCACCGA AGCCATCCTG GCCGAGGTGG CGGTCGATCC GGCCGTCGGA GCAGTGGGGA TCAGCCTGGC CGGGCCGGTG GATCCCAGTT CGGACATGGT CACCCACTCC CCTTTTCTCG GCTGGGAGGA CGTACCCCTG GCTCGCTTGG TCAGCGAGCG AACGGGATTG CCCACCGTGA TCGAAAATGA CGTGCGGGCG CTGACCGCCG CCGAGCATTG GTTCGGCGCA GCCGCGGGCG CAACCGATTT CGTCTTGGTC ACCATCGGCG CGGGCATCGG CTGCGGGGTC GTGATCGGTG ACCGGTTGGT TGACGGCAAC ACCGGTGGCG CAGGCCAGAT CGGGCACCTG CCGATCACCC CGTCCGGGCC GTTGTGCGAA CGTGGTCATC GCGGCTGCGC CCGGTCGTAC TTGGCGTCCT CGGCGATGGT CGGACAGGCG TCCATGGCCC TGCACCGGCC CGATCTCACC TATGCCGAAC TCGTGTCGTT GGCCCACCAG GGCGAGCGGG TCGCCAGCCG GGTCGTGCGG GATGCCGGCT ACGCGTTGGG CACCCTGATC GGACTGGTGA CCGCGATCAC CGCGCCCAGC AAGGTGATCA TCTCCGGTGA GGGGGTCACG ATGGTCCCGC TGGTCATGGA CGTCGTGCAG GAGCGGGCCA GCGAGGTCGA ACACTGGGCC GTGCCCGATG TTCCCATCGA GATTGCCGAA TTCGGCTTCG TGGAATGGGC CCGCGGCGCT GCCGTCATTG CCCTGCAGCA ACTACTGGAA GCGGCCATTA GCCCCGCCTG A
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Protein sequence | MSERTESFPA LSEGSRAALV RLLVHGPASR ADLARRLRLS PASLTRIVRT LEDSGLVVES ETTVPQRMGR PSQAMEVNVD AVHLVGIKLL AGEINLVRTD MRSTVLGHRT IPLQTVPLDP AIDRITEAIL AEVAVDPAVG AVGISLAGPV DPSSDMVTHS PFLGWEDVPL ARLVSERTGL PTVIENDVRA LTAAEHWFGA AAGATDFVLV TIGAGIGCGV VIGDRLVDGN TGGAGQIGHL PITPSGPLCE RGHRGCARSY LASSAMVGQA SMALHRPDLT YAELVSLAHQ GERVASRVVR DAGYALGTLI GLVTAITAPS KVIISGEGVT MVPLVMDVVQ ERASEVEHWA VPDVPIEIAE FGFVEWARGA AVIALQQLLE AAISPA
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