| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1762 |
|---|
| Symbol | |
|---|
| ID | 8447364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1928532 |
|---|
| End bp | 1929968 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040888 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003201141 |
|---|
| Protein GI | 258651985 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000778911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.308446 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCAC ACGAGCGGTT CTCCGCGGTC CCGGATCACC GCTCGGAGCG CGCGGCCGGT
CGGCCGGCCT CGGCGGTGCT GCGGTGGCAA CGTTCCGCGG GCAACGCCGC GGTGGCCGGC
GTCCTGCAAC GCGCCGCCGG GCGCGAGGTG GTGAGCCGGG ACGCGGCGGG CGCGGTCGCC
GCGTCCCCCG TCGAGGGGTT GGCCACCAAG GCCGGCAGCC CGGCCGGCCT GCGCGCCATG
CTGGCCGCCA ACCCGGGGTT GGCTCAGCAG GTCGTCAGCT GGTTCGCCGC CGGGAACGTC
GACGAGTCGC TCAACGCGAT GCTGGGTGAG GCGTTCTCGC CCGCCGCCGC CCGGCAACAG
CAGCAAGCAC CCGGCGGCGC ATCCGGAACG GGGCCGACCG CCCCGACCGA TCCCAGCGGC
GCCGGTGCGC CGGAGAAGGC GCCCAAGGAC CCCACCCTGC CGTTACCGCC GGCGCTGACG
GGGACCAAGA CCCTGCTCAA GGGTGACCTC ACCTGGACGC TGGCCCCGGC CAATCACCAG
AGCGCGCGGA TCGACCTGGA CTTCAAGCCC GACGCGACCA AGGTCGACGC GAAGACGGTC
AGCTACGGGC AGACGGTGAT CAACAAGATC GGCTCCGACC TGGCCTATGC CGGTGGGACC
GAGGCCGACC CGGCCCGCAA CAAGGCCAAG TTCCAGCCGT TCGAGGATCC GACCTCCAAG
CACCGTATCG ATCACCTCGT CGACACCGAG AACGACCCCT TCTACGGAGC GGAATGGGAC
CAGGCGACCA AGTCCTGGGC CAACGAGTCG CCCGGGCGGC GGGTCGGGGC ATCGTCGACC
AAGACCGGGG TGTCGACCTC GGCGACGATG GACGACACCC CGGAGGCGCC CGCGCCCCGC
GCCGGAAAGG GCGACTCGGA GCTGTCGTTC GAATCGGTGC CGATGGTGCT CGAGACGCGC
GAGCCGTTGG GCGCGATCCT GTGGGGCTTC AAGATCGAGG ACAAGGAGAA CGCGCCGATC
GTGCTCACGG GCGCCAAGGA CGCGGACGTG ACCGATACGC CGTCGGCGGC CTGGGGCGCC
ACGATGGATC AGTACTACGC CGCGAAGTAC GCTGAGATCC TCGACGACTT CGACATCGGC
AAGGCCGATC TCAAGGACGC GCACAAGACC CAGCTGGACT CCGTGGTGAC CAAGCTGCAG
GGCAACGCCG CGCTGCGCGC CCAACTCGGG GGAGCGGCGG ATCTCACCGG CGGGGCGAAG
GTGAACATGG CGCTGAGTCT GAAGCGGGCC GAGAATGCCC GGGATTACCT GGTCTCCAAG
GGCATCGACG CCGCGCGCCT GGAGGTGCAG AGCTACGGCG CCGACTGGGC CCGGGTCGCG
ACCACGACCG GTACCAATGA AAGCAAGAAT CGCCGGGTCC AGGTGTGGGT GCACTGA
|
|---|
| Protein sequence | MRAHERFSAV PDHRSERAAG RPASAVLRWQ RSAGNAAVAG VLQRAAGREV VSRDAAGAVA
ASPVEGLATK AGSPAGLRAM LAANPGLAQQ VVSWFAAGNV DESLNAMLGE AFSPAAARQQ
QQAPGGASGT GPTAPTDPSG AGAPEKAPKD PTLPLPPALT GTKTLLKGDL TWTLAPANHQ
SARIDLDFKP DATKVDAKTV SYGQTVINKI GSDLAYAGGT EADPARNKAK FQPFEDPTSK
HRIDHLVDTE NDPFYGAEWD QATKSWANES PGRRVGASST KTGVSTSATM DDTPEAPAPR
AGKGDSELSF ESVPMVLETR EPLGAILWGF KIEDKENAPI VLTGAKDADV TDTPSAAWGA
TMDQYYAAKY AEILDDFDIG KADLKDAHKT QLDSVVTKLQ GNAALRAQLG GAADLTGGAK
VNMALSLKRA ENARDYLVSK GIDAARLEVQ SYGADWARVA TTTGTNESKN RRVQVWVH
|
|---|
| |