Gene Namu_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1733 
Symbol 
ID8447335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand+ 
Start bp1896939 
End bp1897580 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content73% 
IMG OID645040859 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003201112 
Protein GI258651956 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0446931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00691691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGACGG CCGGCCGCCG CGGCCCCAGT CAGGAACGAG GAGTCCTGCT GGACCGCATC 
GTCACCGTGG CGCGGGCATC GTTTGCCGAG CACGGGTGGG CGGGTACGAC GCTCCGGGCG 
GTCGCCCGGG AGGCCGGCGT CGATTCCCGG CTGGTGTCGT ACTACTTCCG GGACAAGACG 
GCGCTGCTGC AAGCTTGCCT GCAACCGCCG CCCGGGTACC TCGAACGCAT CGCCGTGGTC 
GCCGCCTCGC CGCTGCCGCA GCGCGGATCG GCGCTGGTGC AGACGTTGCT GGACGCCTGG 
AACGACCCGG CCACGGCCGC CGTGCTGCGC TCGATCATCC TGACCGCCGC GCACGAACCG 
GTGGCCCTGG ACCGGCTCGG CCTCATCTTT CGCGAGAGCA TGATCGGGGT GGTCGCCCGC 
GAACTCGATG ACGACGAGCG CCTGTTGCGG GCCGGGCTGG TGGCCAGTCA ACTCGTCGGG 
CTGGCCATGA CCCGCTACCT CTGGCGGCTC CAGCCGATCG CCGACCTGCC CGACGACGCG 
GTGGTCCGCC TGATCGGGCC CGCCGTGGCC GCCTTCCTCG TCGGACCGCT GCCGCGGCCC 
GAGCCGGCTT CGGGCTCGAC CGACGACGGT CCGGCCGCCT AA
 
Protein sequence
MSTAGRRGPS QERGVLLDRI VTVARASFAE HGWAGTTLRA VAREAGVDSR LVSYYFRDKT 
ALLQACLQPP PGYLERIAVV AASPLPQRGS ALVQTLLDAW NDPATAAVLR SIILTAAHEP 
VALDRLGLIF RESMIGVVAR ELDDDERLLR AGLVASQLVG LAMTRYLWRL QPIADLPDDA 
VVRLIGPAVA AFLVGPLPRP EPASGSTDDG PAA