Gene Namu_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1723 
Symbol 
ID8447325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand- 
Start bp1886630 
End bp1887241 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content72% 
IMG OID645040849 
Productprotein of unknown function UPF0126 
Protein accessionYP_003201102 
Protein GI258651946 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000275275 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.128293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGG GACGACTGTT GACGGCCGCC GACCTGGCGG CCACCTGCCT GTTCGCCATC 
GAAGGGGCGA TCGTCGCCCG CTACGCCGAC CTGGACGTCT TCGGCATCCT GGTGATCGGC 
TTCGTCAGCG CCCTGGTCGG CGGGATCATC CGGGACGTGC TGATCGGCTA CACCCCGCCG 
GCCTCCCTGC GCAGCGCGAT CTACCCGCTG ACCGCCTTCG TCGGGGCGGG CGCCGTGATC 
GCCCTGGACC AGTTCGTCGA GCGGGTGCCG GTGGCCCTGT TGCAGTTCAC CGACGCCGCC 
GGGCTGGCCC TGTTCGCCGT CGTCGGGGCG ACCAAGGCGG TCGACTTCAA GATCAACGGC 
TTCGTGGCCA CCCTGCTCGG CGCGGTCTCC GCGGTCGGCG GCGGGGTGGT GCGGGACCTG 
CTGCTCAACG TGGTGCCGGG CATCCTGCGC CAGGACATCT ACGCGGTCGC CGCCCTGGCC 
GGAGCCGCGG TGACCGTACT GGCCCTGCGC TGGCGCATGC CCCGCGCGGC CGCCATGAGC 
ATCGGCTTGG CCGTCTGTTT CCTGCTGCGC ATCGTCAGCG TCTGGCAGGG CTGGCACCTG 
CCCCGGCTGT GA
 
Protein sequence
MTAGRLLTAA DLAATCLFAI EGAIVARYAD LDVFGILVIG FVSALVGGII RDVLIGYTPP 
ASLRSAIYPL TAFVGAGAVI ALDQFVERVP VALLQFTDAA GLALFAVVGA TKAVDFKING 
FVATLLGAVS AVGGGVVRDL LLNVVPGILR QDIYAVAALA GAAVTVLALR WRMPRAAAMS 
IGLAVCFLLR IVSVWQGWHL PRL