| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1721 |
|---|
| Symbol | |
|---|
| ID | 8447323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1885315 |
|---|
| End bp | 1886301 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645040847 |
|---|
| Product | peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase |
|---|
| Protein accession | YP_003201100 |
|---|
| Protein GI | 258651944 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4927] Predicted choloylglycine hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00157211 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.132726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAC TGACGCACTA CCTGATTCGC GAGGATCGGC CCGGCCCGCG CTGGCGCCAC
CTCTTCGACG CCCTGTGGCC CGGGTACCGG GCCTGGTACC TGCAGGACGG GGACGCGGCC
CGGCCGAGTC TGCCGGCCGC CCGGGCCGCG CTGGAGCGGT TCATGCCCGA GCTGGTTCCC
ACCTGGTCGG CACTGGTCGA CCTGACCGGC GACGACCCGA CCGCGGCCCG CATGCTCACC
CTCTGGGACC CGCCCGCGTT CGCGCCCGCC TGCTCCCAGG TGGCCGTCCC CGGGCCCGAT
CCGGTCCTCG TCCGCAATTA CGACTACCAC CCGAACCTGT CCGAAAGGAC CATCTATTCC
AGCTGTTTCG ACGACCGCCG GGTGATCGGC ACGAGTGATT GCCTGTGGGG CCTTCTGGAC
GGGATGAACC AGGACGGCCT GGCCGTCTCG CTCACCTTCG CCGGCCAACG GGGGTCCGGA
TCCGGCTTCG GGATCCCGCT GGTCGTCCGC TACCTGCTGC AGACGGCAGG CTCGGTGGCC
GAGGCGGTGT CGATGCTGGA CCGGGTGCCG GTGCACATGG CCTACAACCT GCTGCTGATG
GACCGGCACG AGGCGGTCAC CGTGCTGGTG CAGCCCGGCC GGCCGCCCGA GCGGTTCGAC
CTGCGGGCGA GCACCAACCA CCGGGGCACC GTCCCGCTCG ATCCCGAGCA TGCGGCTCGT
TTCCGCAGCG TCGAGCGGCA GGAGGCGCTG TTCGACCTGC TCGGCCGGCG GCCGAGTCAC
CCGGACACGG TGAGGGCGTT CCTGCGGCCG CCGCTGTACA ACACCCGGTT CGACGAGGCG
TTCGGCACCC TCTACACGGC GGCCTACCGG CCGGCGTCCG GCGTGGTCGA CTTCGTCTGG
CCGGGCTCGC GGTGGCGGCT GGACTTCGAC TCGCCCGGCG GCACCCACCA GGCGGTCTAT
CGGGACCGGT TCGACGCGGC GGCTTGA
|
|---|
| Protein sequence | MPELTHYLIR EDRPGPRWRH LFDALWPGYR AWYLQDGDAA RPSLPAARAA LERFMPELVP
TWSALVDLTG DDPTAARMLT LWDPPAFAPA CSQVAVPGPD PVLVRNYDYH PNLSERTIYS
SCFDDRRVIG TSDCLWGLLD GMNQDGLAVS LTFAGQRGSG SGFGIPLVVR YLLQTAGSVA
EAVSMLDRVP VHMAYNLLLM DRHEAVTVLV QPGRPPERFD LRASTNHRGT VPLDPEHAAR
FRSVERQEAL FDLLGRRPSH PDTVRAFLRP PLYNTRFDEA FGTLYTAAYR PASGVVDFVW
PGSRWRLDFD SPGGTHQAVY RDRFDAAA
|
|---|
| |